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12 Open 4 Closed
12 Open 4 Closed
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Issues list

Bug: Variant gets normal_artifact Filter by Mutect2 bug Something isn't working
#16 opened Aug 1, 2024 by berntpopp
@berntpopp
Feature request: calculate corss-contamination enhancement New feature or request
#15 opened Aug 1, 2024 by berntpopp
@berntpopp
Bug: Plasmid contamination bug Something isn't working enhancement New feature or request
#14 opened Aug 1, 2024 by berntpopp
@berntpopp
Feature request: Add expression in adrenal gland to annotation analysis Anaylsis to perform for the project. enhancement New feature or request
#13 opened Jul 29, 2024 by berntpopp
@berntpopp
Refactor: transcribe the different TODOs into Issues documentation Improvements or additions to documentation
#12 opened Jun 26, 2024 by berntpopp
@berntpopp
Documentation: Sample selection and preparation documentation Improvements or additions to documentation
#11 opened May 30, 2024 by berntpopp
@FrederikeButz
Analysis: Create a general overview of the sequencing and analyses in the project documentation Improvements or additions to documentation
#10 opened May 30, 2024 by berntpopp
@berntpopp
Consolidate sample overview documentation Improvements or additions to documentation enhancement New feature or request
#9 opened May 30, 2024 by berntpopp
@berntpopp @FrederikeButz
Restructure repository, update README files and documentation documentation Improvements or additions to documentation enhancement New feature or request
#6 opened Oct 30, 2023 by berntpopp
@berntpopp
1
Write CNV analysis script enhancement New feature or request
#5 opened Oct 30, 2023 by berntpopp
@berntpopp
Write QC script enhancement New feature or request
#4 opened Oct 30, 2023 by berntpopp
@berntpopp
Fix disk space problem in gatk_calculate_contamination.smk script bug Something isn't working
#3 opened Oct 30, 2023 by berntpopp
@berntpopp
ProTip! Follow long discussions with comments:>50.