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Write QC script #4

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berntpopp opened this issue Oct 30, 2023 · 0 comments

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berntpopp commented Oct 30, 2023

The script should calculate typical NGS QC measurements and should ideally be applicable to both FASTQ and BAM files.

Tools to use:

FGastQC
Qualimap
bedtools coverage

Ideally it generate reports per input and a sumamry report over all analyses (R script).

berntpopp added the enhancement label

berntpopp self-assigned this

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