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16 Open 29 Closed
16 Open 29 Closed
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Issues list

Pipeline fails when "test.fa" is missing bug Something isn't working
#90 opened Nov 27, 2024 by travis-m-blimkie
1
Running the pipeline with only "--help" returns error bug Something isn't working
#89 opened Nov 27, 2024 by travis-m-blimkie
Harmonization of Output Across Annotation Modules and Sub-Workflows enhancement New feature or request
#87 opened Nov 20, 2024 by anwarMZ
5 tasks
Add Preset Parameters for Common Analyses in BACPAQ Workflow enhancement New feature or request
#86 opened Nov 20, 2024 by anwarMZ
4 tasks
@jonathho
Create a subworkflow for Variant visualization enhancement New feature or request
#85 opened Nov 20, 2024 by jimmyliu1326
2 tasks
Create a Subworkflow for Variant calling enhancement New feature or request
#84 opened Nov 20, 2024 by jimmyliu1326
5 of 9 tasks
@azmigueldario @mayee123
1
Create a nextflow module for core-snp-filter enhancement New feature or request
#82 opened Nov 20, 2024 by jimmyliu1326
2 tasks
@azmigueldario
Create a Nextflow module for igvreports enhancement New feature or request
#80 opened Nov 20, 2024 by jimmyliu1326
2 tasks
@KijinKims
Create a Nextflow module for Snippy_core enhancement New feature or request
#79 opened Nov 20, 2024 by jimmyliu1326
2 tasks done
@mayee123
Create a Nextflow module for Nucmer enhancement New feature or request
#78 opened Nov 20, 2024 by jimmyliu1326
1 of 2 tasks
@azmigueldario
2
Create a Nextflow module for IQTREE enhancement New feature or request
#77 opened Nov 20, 2024 by jimmyliu1326
1 of 2 tasks
Create a Nextflow module for Gubbins enhancement New feature or request
#76 opened Nov 20, 2024 by jimmyliu1326
2 tasks done
@azmigueldario
Create a Nextflow module for Snippy enhancement New feature or request
#75 opened Nov 20, 2024 by jimmyliu1326
2 tasks done
@mayee123
Bug with aggregation of Quast reports bug Something isn't working
#73 opened Oct 21, 2024 by travis-m-blimkie
@anwarMZ @jimmyliu1326
Add description for the parameters exposed to the workflow documentation Improvements or additions to documentation
#27 opened Oct 31, 2023 by anwarMZ
@azmigueldario
Filter by assemblies length enhancement New feature or request
#11 opened Jul 6, 2023 by davidtong28
5 tasks
@azmigueldario
ProTip! Updated in the last three days: updated:>2024-12-09.