Skip to content

Commit

Permalink
ci: fix static code analysis
Browse files Browse the repository at this point in the history
  • Loading branch information
deliaBlue committed Aug 18, 2024
1 parent ce0d897 commit fcc5ac4
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions scripts/iso_name_tagging.py
Original file line number Diff line number Diff line change
Expand Up @@ -267,9 +267,9 @@ def get_tags(
def main(args) -> None:
"""Add intersecting feature(s) into a SAM file as a tag."""
intersect_data = parse_intersect_output(
intersect_file=args.bed,
ID=args.id,
extension=args.extension,
intersect_file=args.bed,
ID=args.id,
extension=args.extension,
)

with pysam.AlignmentFile(args.sam, "r") as samfile:
Expand Down

0 comments on commit fcc5ac4

Please sign in to comment.