bioinfoscripts

This repo contains scripts that can be used to perform some bioinformatics tasks. More bioinformatics tutorial can be found on my youtube channel: https://www.youtube.com/channel/UCOJM9xzqDc6-43j2x_vXqCQ/videos

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Name		Name	Last commit message	Last commit date
Latest commit History 53 Commits
downloaders		downloaders
exampledata		exampledata
E11.fasta		E11.fasta
LICENSE		LICENSE
README.md		README.md
abricate_amr_finder.sh		abricate_amr_finder.sh
prepare_env.sh		prepare_env.sh
rpoB_gene_extractor.py		rpoB_gene_extractor.py
sra_data_downloader.sh		sra_data_downloader.sh
staramr_to_gff.py		staramr_to_gff.py
tcga_download_uid.py		tcga_download_uid.py
testvolcano.csv		testvolcano.csv
volcano-plot-in-python.py		volcano-plot-in-python.py
workshopfiles.zip		workshopfiles.zip