🌊 🦠 🌿 A fast and flexible modelling environment written in Julia for modelling the coupled interactions between ocean biogeochemistry, carbonate chemistry, and physics

The ideal tool for exploring global marine biogeochemical cycles.

Julia interface to MITgcm

Soil organic carbon data recovery and harmonization (SOC-DRaHR)

Material to help teach and learn hydrology/biogeochemistry online

This is the code repository for CLM-Microbe model.

Metos3D main package

Lab calculations, workflows

As part of my PhD I created a 1D biogeochemical configuration based on PISCES model (version 1 - Bopp et al, 2005) The configuration was created to study the impact of environmental changes (mainly Mixed Layer Depth and Light) over Southern Ocean primary production, from the seasonal to decadal scales.

Compute gasfluxes with R

Notebooks describing the methods used for the publication: "Empirical up-scaling of OzFlux eddy covariance for high-resolution monitoring of terrestrial carbon uptake in Australia. AusEFlux datasets are freely available on Zenodo at the DOI below.

Collection of GFDL generic tracers and associated code for use with MOM and GOLD

A 1D model NPZD model + ballasting

Fortran code used for MEP model to describe microbial biogeochemistry in Siders Pond, MA

Building resilience to environmental change for culturally important species.

Routines to model ocean carbonate system thermodynamics

A compilation of the scripts produced during my master's degree in the lab of Jean-François Lapierre at Université de Montréal

The ACCESS Earth System Model (ACCESS-ESM) is a fully-coupled global climate model that includes atmoshpere, land, ocean, sea ice, ocean biogeochemistry and land biogeochemistry components, linked together by a coupler.

Significance of non-microbial processes in organic matter decompositon in ecosystems across scales

OdLake (one-day lake simulation model) is a one-dimensional lake model, containing the bacteria growth, nutient cycling and trace element (iron and manganese) cycling.