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Update two common encounter codes for relevancy #1540

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Update two common encounter codes for relevancy #1540

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2289973
Update two common encounter codes for relevancy
lmd59 Dec 9, 2024
0cb4023
Replace text for additional displays that don't show "(procedure)"
lmd59 Dec 11, 2024
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4 changes: 2 additions & 2 deletions src/main/java/org/mitre/synthea/export/FhirDstu2.java
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Original file line number Diff line number Diff line change
Expand Up @@ -535,8 +535,8 @@ private static Entry encounter(Person person, Entry personEntry,
encounterResource.setStatus(EncounterStateEnum.FINISHED);
if (encounter.codes.isEmpty()) {
// wellness encounter
encounterResource.addType().addCoding().setCode("185349003")
.setDisplay("Encounter for check up").setSystem(SNOMED_URI);
encounterResource.addType().addCoding().setCode("86013001")
.setDisplay("Periodic reevaluation and management of healthy individual (procedure)").setSystem(SNOMED_URI);
} else {
Code code = encounter.codes.get(0);
encounterResource.addType(mapCodeToCodeableConcept(code, SNOMED_URI));
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4 changes: 2 additions & 2 deletions src/main/java/org/mitre/synthea/export/FhirR4.java
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Expand Up @@ -900,8 +900,8 @@ private static BundleEntryComponent encounter(Person person, BundleEntryComponen
encounterResource.setStatus(EncounterStatus.FINISHED);
if (encounter.codes.isEmpty()) {
// wellness encounter
encounterResource.addType().addCoding().setCode("185349003")
.setDisplay("Encounter for check up").setSystem(SNOMED_URI);
encounterResource.addType().addCoding().setCode("86013001")
.setDisplay("Periodic reevaluation and management of healthy individual (procedure)").setSystem(SNOMED_URI);
} else {
Code code = encounter.codes.get(0);
encounterResource.addType(mapCodeToCodeableConcept(code, SNOMED_URI));
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4 changes: 2 additions & 2 deletions src/main/java/org/mitre/synthea/export/FhirStu3.java
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Expand Up @@ -583,8 +583,8 @@ private static BundleEntryComponent encounter(Person person, BundleEntryComponen
encounterResource.setStatus(EncounterStatus.FINISHED);
if (encounter.codes.isEmpty()) {
// wellness encounter
encounterResource.addType().addCoding().setCode("185349003")
.setDisplay("Encounter for check up").setSystem(SNOMED_URI);
encounterResource.addType().addCoding().setCode("86013001")
.setDisplay("Periodic reevaluation and management of healthy individual (procedure)").setSystem(SNOMED_URI);

} else {
Code code = encounter.codes.get(0);
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4 changes: 2 additions & 2 deletions src/main/java/org/mitre/synthea/export/TextExporter.java
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Expand Up @@ -71,9 +71,9 @@
* 2017-11-01 : Body Height 181.6 cm
* --------------------------------------------------------------------------------
* ENCOUNTERS:
* 2017-11-01 : Encounter for check up (procedure)
* 2017-11-01 : Periodic reevaluation and management of healthy individual (procedure)
* 2016-12-28 : Encounter for Viral sinusitis (disorder)
* 2016-10-26 : Encounter for check up (procedure)
* 2016-10-26 : Periodic reevaluation and management of healthy individual (procedure)
* </pre>

* Exporter for a simple human-readable text format per encounter.
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4 changes: 2 additions & 2 deletions src/main/java/org/mitre/synthea/modules/EncounterModule.java
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Expand Up @@ -34,8 +34,8 @@ public final class EncounterModule extends Module {
public static final int EMERGENCY_SYMPTOM_THRESHOLD = 500;
public static final String LAST_VISIT_SYMPTOM_TOTAL = "last_visit_symptom_total";

public static final Code ENCOUNTER_CHECKUP = new Code("SNOMED-CT", "185349003",
"Encounter for check up (procedure)");
public static final Code ENCOUNTER_CHECKUP = new Code("SNOMED-CT", "86013001",
"Periodic reevaluation and management of healthy individual (procedure)");
public static final Code ENCOUNTER_EMERGENCY = new Code("SNOMED-CT", "50849002",
"Emergency room admission (procedure)");
public static final Code WELL_CHILD_VISIT = new Code("SNOMED-CT", "410620009",
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4 changes: 2 additions & 2 deletions src/main/resources/costs/encounters.csv
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@@ -1,8 +1,8 @@
CODE,MIN,MODE,MAX,COMMENTS
185317003,75,75,75,Telephone encounter (procedure) - Prior costs update source
185345009,75,75,75,Encounter for symptom - Prior costs update source
185347001,75,75,75,Encounter for problem - Prior costs update source
185349003,75,75,75,Encounter for 'check-up' - Prior costs update source
281036007,75,75,75,Follow-up consultation (procedure) - Prior costs update source
86013001,75,75,75,Periodic reevaluation and management of healthy individual (procedure) - Prior costs update source
185389009,75,75,75,Follow-up visit (encounter) - Prior costs update source
183452005,75,75,75,Encounter Inpatient - Prior costs update source
270427003,75,75,75,Patient-initiated encounter - Prior costs update source
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4 changes: 2 additions & 2 deletions src/main/resources/modules/acute_myeloid_leukemia.json
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Expand Up @@ -386,8 +386,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Wait for Treatment"
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4 changes: 2 additions & 2 deletions src/main/resources/modules/allergies.json
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Expand Up @@ -101,8 +101,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"conditional_transition": [
Expand Down
8 changes: 4 additions & 4 deletions src/main/resources/modules/anemia/anemia_sub.json
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Expand Up @@ -265,8 +265,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"conditional_transition": [
Expand Down Expand Up @@ -1010,8 +1010,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"conditional_transition": [
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4 changes: 2 additions & 2 deletions src/main/resources/modules/appendicitis.json
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Expand Up @@ -262,8 +262,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Appendectomy"
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8 changes: 4 additions & 4 deletions src/main/resources/modules/attention_deficit_disorder.json
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Expand Up @@ -74,8 +74,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "ADD_Symptom1"
Expand Down Expand Up @@ -194,8 +194,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Behavior_Treatment_Procedure"
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8 changes: 4 additions & 4 deletions src/main/resources/modules/breast_cancer.json
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Expand Up @@ -1522,8 +1522,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Chemotherapy Drugs",
Expand Down Expand Up @@ -1768,8 +1768,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Chemotherapy Drugs"
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4 changes: 2 additions & 2 deletions src/main/resources/modules/breast_cancer/chemotherapy_breast.json
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Expand Up @@ -163,8 +163,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Choose Chemo Drug"
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4 changes: 2 additions & 2 deletions src/main/resources/modules/breast_cancer/hormonetherapy_breast.json
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Expand Up @@ -395,8 +395,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"conditional_transition": [
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20 changes: 10 additions & 10 deletions src/main/resources/modules/breast_cancer/surgery_therapy_breast.json
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Expand Up @@ -437,8 +437,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"conditional_transition": [
Expand Down Expand Up @@ -500,8 +500,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"complex_transition": [
Expand Down Expand Up @@ -677,8 +677,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"complex_transition": [
Expand Down Expand Up @@ -972,8 +972,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Advanced_drugs"
Expand Down Expand Up @@ -1038,8 +1038,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"conditional_transition": [
Expand Down
36 changes: 18 additions & 18 deletions src/main/resources/modules/colorectal_cancer.json
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Expand Up @@ -105,8 +105,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185349003",
"display": "Encounter for check up (procedure)"
"code": "86013001",
"display": "Periodic reevaluation and management of healthy individual (procedure)"
}
],
"direct_transition": "Routine_Colonoscopy_Procedure",
Expand Down Expand Up @@ -421,8 +421,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "End_Biopsy_Followup"
Expand Down Expand Up @@ -467,8 +467,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185349003",
"display": "Encounter for check up (procedure)"
"code": "86013001",
"display": "Periodic reevaluation and management of healthy individual (procedure)"
}
],
"direct_transition": "Followup_Colonoscopy_Procedure",
Expand Down Expand Up @@ -714,8 +714,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185349003",
"display": "Encounter for check up (procedure)"
"code": "86013001",
"display": "Periodic reevaluation and management of healthy individual (procedure)"
}
],
"direct_transition": "Diagnostic_Colonoscopy_Procedure",
Expand Down Expand Up @@ -1039,8 +1039,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Colorectal_Cancer_CarePlan"
Expand Down Expand Up @@ -1192,8 +1192,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Partial_Colectomy_Procedure"
Expand Down Expand Up @@ -1325,8 +1325,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Diverting_Colostomy_Procedure"
Expand Down Expand Up @@ -1455,8 +1455,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Pain_Vital_4"
Expand Down Expand Up @@ -1550,8 +1550,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185349003",
"display": "Encounter for check up (procedure)"
"code": "86013001",
"display": "Periodic reevaluation and management of healthy individual (procedure)"
}
],
"direct_transition": "End_Colorectal_Cancer_CarePlan"
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12 changes: 6 additions & 6 deletions src/main/resources/modules/congestive_heart_failure.json
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Expand Up @@ -53,8 +53,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Recorded Symptom 1"
Expand Down Expand Up @@ -183,8 +183,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Oxygen_Saturation",
Expand Down Expand Up @@ -938,8 +938,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185347001",
"display": "Encounter for problem (procedure)"
"code": "281036007",
"display": "Follow-up consultation (procedure)"
}
],
"direct_transition": "Echocardiography"
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4 changes: 2 additions & 2 deletions src/main/resources/modules/cystic_fibrosis.json
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Expand Up @@ -736,8 +736,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185349003",
"display": "Encounter for check up (procedure)"
"code": "86013001",
"display": "Periodic reevaluation and management of healthy individual (procedure)"
}
],
"conditional_transition": [
Expand Down
4 changes: 2 additions & 2 deletions src/main/resources/modules/dental_and_oral_examination.json
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Expand Up @@ -851,8 +851,8 @@
"codes": [
{
"system": "SNOMED-CT",
"code": "185349003",
"display": "Encounter for check up (procedure)"
"code": "86013001",
"display": "Periodic reevaluation and management of healthy individual (procedure)"
}
],
"direct_transition": "Dental consultation and report"
Expand Down
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