Added notes to documentation #253
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| name: CI Test for clingraph | |
| on: [push] | |
| jobs: | |
| lint: | |
| name: Lint clingraph | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Setup python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.9" | |
| - name: Install dependencies | |
| shell: pwsh | |
| run: pip install -e .[dev] | |
| - name: Run linter | |
| shell: pwsh | |
| run: pylint clingraph | |
| pip: | |
| name: Test clingraph using pip | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Setup python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.9" | |
| - name: Install dependencies | |
| shell: pwsh | |
| run: | | |
| sudo apt install graphviz | |
| pip install -e .[dev,gif,tex] | |
| cat /opt/hostedtoolcache/Python/3.9.10/x64/lib/python3.9/site-packages/clingraph/orm.py | |
| cat clingraph/orm.py | |
| - name: Run tests | |
| shell: pwsh | |
| run: pytest -v | |
| conda: | |
| name: Test clingraph using conda | |
| needs: [lint, pip] | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ['ubuntu-latest', 'macos-latest','windows-latest'] | |
| python-version: ["3.8", "3.9"] | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Setup miniconda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: clingraph | |
| python-version: ${{ matrix.python-version }} | |
| channels: conda-forge | |
| channel-priority: strict | |
| auto-update-conda: true | |
| environment-file: environment.yml | |
| - name: Export env | |
| shell: pwsh | |
| run: conda env export | |
| - name: Install development tools | |
| shell: pwsh | |
| run: conda install pylint pytest | |
| - name: Install extra tools | |
| shell: pwsh | |
| run: conda install -c conda-forge dot2tex imageio | |
| - name: List conda | |
| shell: pwsh | |
| run: conda list | |
| - name: Run tests | |
| shell: pwsh | |
| run: | | |
| $env:PYTHONPATH = "." | |
| pytest -v |