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Add option --fix to update the meta.yml file of subworkflows. #3077

Merged
merged 14 commits into from
Sep 27, 2024
Merged

Add option --fix to update the meta.yml file of subworkflows. #3077

merged 14 commits into from
Sep 27, 2024

Commits on Jul 24, 2024

  1. add --fix option to fix the meta.yml of subworkflows

    @mirpedrol
    mirpedrol committed Jul 24, 2024
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  2. update changelog

    @mirpedrol
    mirpedrol committed Jul 24, 2024
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  3. fix typing and linting

    @mirpedrol
    mirpedrol committed Jul 24, 2024
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Commits on Sep 20, 2024

  1. Merge branch 'dev' of https://github.com/nf-core/tools into subworkfl… 

    …ows-meta-yml-restructure
    @mirpedrol
    mirpedrol committed Sep 20, 2024
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  2. Merge branch 'dev' into subworkflows-meta-yml-restructure

    @mirpedrol
    mirpedrol authored Sep 20, 2024
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  3. fix pytests by mocking biotools, adding a meta to the test module and… 

    … running prettier to meta.yml file
    @mirpedrol
    mirpedrol committed Sep 20, 2024
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Commits on Sep 23, 2024

  1. update template modules

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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  2. add testing the module name back

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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  3. fix info command for the new yaml structure

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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  4. fix modules pytest

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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  5. fix subworkflows pytest

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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  6. update pipeline for multiqc update

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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  7. fix more pytests

    @mirpedrol
    mirpedrol committed Sep 23, 2024
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Commits on Sep 27, 2024

  1. remove code duplication and format components info command

    @mirpedrol
    mirpedrol committed Sep 27, 2024
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