Merge pull request #430 from sateeshperi/dev

update SAMTOOLS_FAIDX fasta input after reorg
nf-core · Oct 17, 2024 · 0b83720 · 0b83720
2 parents 58b1efe + c8e3ccd
commit 0b83720
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/subworkflows/local/prepare_genome/main.nf b/subworkflows/local/prepare_genome/main.nf
@@ -88,7 +88,7 @@ workflow PREPARE_GENOME {
             ch_fasta_index.dump(tag: 'PREPARE_GENOME: ch_fasta_index')
         } else {
             SAMTOOLS_FAIDX(
-                ch_fasta.map{ fasta -> [[:], fasta]},
+                ch_fasta,
                 [[:], []]
             )
             ch_fasta_index = SAMTOOLS_FAIDX.out.fai.map{ return(it[1])}