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Add chopper and nanoq options for longread preprocessing #692

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Add chopper and nanoq options for longread preprocessing #692

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Commits on Oct 14, 2024

  1. install chopper from nf-core/chopper

    @muabnezor
    muabnezor committed Oct 14, 2024
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  2. Add nanoq from nf-core/nanoq, and add code in longread_preprocessing … 

    …subworkflow for alternative use of chopper for lambda-removal instead of nanolyse, and nanoq for longread filtering instead of filtlong
    @muabnezor
    muabnezor committed Oct 14, 2024
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  3. Fix config for modules nanoq and filtlong in modules.config

    @muabnezor
    muabnezor committed Oct 14, 2024
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Commits on Oct 15, 2024

  1. Make it possible to use chopper as filtering tool as well

    @muabnezor
    muabnezor committed Oct 15, 2024
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