Changed variable name to avoid possible overwrite.

ctmrbio · Jan 18, 2021 · a851c5e · boulund · Jan 18, 2021 · a851c5e
1 parent b793207
commit a851c5e
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/bin/sendsketch_to_prokka.py b/bin/sendsketch_to_prokka.py
@@ -37,8 +37,8 @@ def parse_stain_database(stain_file):
     stain_db = {}
     with open(stain_file, "r") as stain:
         for line in stain:
-            genus, stain = line.split("\t")
-            stain_db[genus] = stain.rstrip()
+            genus, curr_stain = line.split("\t")
+            stain_db[genus] = curr_stain.rstrip()
     return stain_db