v1.15.0

What's Changed

• [python] Shuffle multiple SOMA chunks by @atolopko-czi in #1103
• [python] Relax pin: tiledbsoma~=1.11.4 by @ryan-williams in #1187
• [pytorch] Set shuffle as default in pytorch, use new algorithm by @ebezzi in #1188
• [python] Remove pytorch pin by @ebezzi in #1190
• [builder] Vector indexing pipeline for Census embeddings by @mlin in #1122
• [builder] Add collection_doi_label to the datasets dataframe by @ebezzi in #1200
• [python] Require scikit-misc < 0.4 by @ebezzi in #1213
• [builder] Upgrade to CELLxGENE schema 5.1 by @Bento007 in #1192
• [docs] Update schema doc for version 2.1.0 by @ebezzi in #1211
• [python] Update scvi pipeline for the June LTS training by @ebezzi in #1173
• [python] Check census version for get_all_available_embeddings by @ivirshup in #1207
• [python] Move to {obs/var} specific arguments for get_anndata by @ivirshup in #1149
• [python] Stop including "do_not_delete" key in result of get_census_version_directory by @ivirshup in #1215
• [python] Add package specific user-agent by @ivirshup in #1193
• [python] Update docs for get_obs, get_var by @ivirshup in #1170
• [python] Geneformer updates for July 2024 LTS by @mlin in #961
• [python] Support custom obs encoders by @ebezzi in #1191
• [python] Fix ExperimentDataPipe length by @ebezzi in #1221
• [python] dataloader optimization (picking up 1169) by @ivirshup in #1224
• [docs] Update census data release page with upcoming LTS information by @pablo-gar in #1210
• [docs] Add PyTorch loaders article release by @pablo-gar in #1214
• [python] Geneformer CLS embeddings by @mlin in #1225
• [docs] Update the Logistic Regression pytorch notebook by @ebezzi in #1230
• [docs] Add metrics article for LTS 2024-12-15 by @pablo-gar in #1233

New Contributors

• @ryan-williams made their first contribution in #1187

Full Changelog: v1.14.1...v1.15.0