simplified examples

braindynamicslab · Dec 18, 2021 · 6571618 · 6571618
1 parent cebc899
commit 6571618
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Showing 2 changed files with 3 additions and 14 deletions.
diff --git a/examples/haxby_decoding/haxby_decoding_neumapper.m b/examples/haxby_decoding/haxby_decoding_neumapper.m
@@ -1,5 +1,5 @@
 %% Configure paths
-addpath(genpath('~/neumapper/code/'));
+addpath(genpath('../../code/'));
 
 
 %% Load the data

diff --git a/examples/trefoil_knot/trefoil_knot_neumapper.m b/examples/trefoil_knot/trefoil_knot_neumapper.m
@@ -1,24 +1,13 @@
 %% Configure paths
-addpath(genpath('~/neumapper/code/neumapper'));
-addpath(genpath('~/neumapper/code/tools'));
+addpath(genpath('../../code/'));
 
 
 %% Load the data
 X = create_trefoil_knot(1000,'euclidean');
 
 
-%% Configure options
+%% Use default options
 options = struct();
-options.binning = 'cball';
-options.dimreduce = 'none';
-options.resolution = 100;
-options.knnparam = 8;
-options.gain = 40;
-
-options.save_to = 'trefoil_knot_neumapper.mat';
-options.save_plot = 'trefoil_knot_neumapper.png';
-options.show_plot = true;
-options.show_embed = true;
 
 
 %% Run NeuMapper