v1.15.0

What's Changed

• fix typing on schema validation error object, remove isBidsy.ts by @rwblair in https://github.com/bids-standard/bids-validator/pull/2163
• fix: avoid Maximum call stack size exceeded by @mguaypaq in https://github.com/bids-standard/bids-validator/pull/2162
• add continous regex for anatomical datatype to file_level_rules.json by @rwblair in https://github.com/bids-standard/bids-validator/pull/2165
• chore: Update bids-schema by @effigies in https://github.com/bids-standard/bids-validator/pull/2168
• [schema] Bump HED validator by @effigies in https://github.com/bids-standard/bids-validator/pull/2169
• chore: Bump schema by @effigies in https://github.com/bids-standard/bids-validator/pull/2172
• CI: Skip legacy validation of dwi_deriv example by @effigies in https://github.com/bids-standard/bids-validator/pull/2177
• fix(cli): Allow blacklisting any modality from schema.rules.modalities by @effigies in https://github.com/bids-standard/bids-validator/pull/2176
• fix: Export types for typescript library users by @nellh in https://github.com/bids-standard/bids-validator/pull/2181
• fix: Use our fork of nifti-reader-js to fix console output bugs by @nellh in https://github.com/bids-standard/bids-validator/pull/2184
• Fix HED error reporting and tests by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2174
• [js] Update all npm dependencies (2024-10-31) by @depfu in https://github.com/bids-standard/bids-validator/pull/2167

Full Changelog: bids-standard/bids-validator@v1.14.14...v1.15.0

v1.14.14

What's Changed

• feat: Update schema to support scanner dwi derivatives by @effigies in https://github.com/bids-standard/bids-validator/pull/2145
• Map issues through the Issue constructor by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2143
• FIX: Disable strictSchema for legacy validator JSON schema validation by @rwblair in https://github.com/bids-standard/bids-validator/pull/2148
• fix: Load .bidsignore in web app by @effigies in https://github.com/bids-standard/bids-validator/pull/2151
• Pass value of ignore test to creation of filetree object. by @rwblair in https://github.com/bids-standard/bids-validator/pull/2152
• feat: Pass hedCode as subcode to group errors by @effigies in https://github.com/bids-standard/bids-validator/pull/2149
• feat(inheritance): Improve error definition for MULTIPLE_INHERITABLE_FILES by @effigies in https://github.com/bids-standard/bids-validator/pull/2155
• change how close is called on json files by @rwblair in https://github.com/bids-standard/bids-validator/pull/2156
• fix: Check for expected error types, rethrow unknown by @effigies in https://github.com/bids-standard/bids-validator/pull/2157

Full Changelog: bids-standard/bids-validator@v1.14.13...v1.14.14

v1.14.12

What's Changed

• chore: Add docstrings and export missing validateCommand object by @nellh in https://github.com/bids-standard/bids-validator/pull/2121
• chore: Add a type to validateCommand for JSR by @nellh in https://github.com/bids-standard/bids-validator/pull/2123

Full Changelog: bids-standard/bids-validator@v1.14.11...v1.14.12

v1.14.11

What's Changed

• fix: Load schema with fetch, default to JSR package by @effigies in https://github.com/bids-standard/bids-validator/pull/2112
• build: Include exports for extending validator in JSR packaging by @nellh in https://github.com/bids-standard/bids-validator/pull/2114
• chore: Import schema and base types from @bids/schema/. by @effigies in https://github.com/bids-standard/bids-validator/pull/2115
• chore(ci): Ignore MRS examples for legacy validator by @effigies in https://github.com/bids-standard/bids-validator/pull/2117
• feat: Validate CITATION.cff by @rwblair in https://github.com/bids-standard/bids-validator/pull/2116
• bump schema package version by @rwblair in https://github.com/bids-standard/bids-validator/pull/2120

Full Changelog: bids-standard/bids-validator@v1.14.10...v1.14.11

v1.14.10

What's Changed

• rf: Rewrite readEntities to give more intuitive results by @effigies in https://github.com/bids-standard/bids-validator/pull/2063
• feat: I/O checks for NIfTI and JSON files by @effigies in https://github.com/bids-standard/bids-validator/pull/2056
• feat: Prune derivatives from main file tree by @effigies in https://github.com/bids-standard/bids-validator/pull/2065
• feat(cli): Detect color support, respect flags and environment variables by @effigies in https://github.com/bids-standard/bids-validator/pull/2068
• feat(legacy): Support local BIDS-URIs for IntendedFor fields by @effigies in https://github.com/bids-standard/bids-validator/pull/2069
• rf(context): Move file tree, schema, and issues into context.dataset by @effigies in https://github.com/bids-standard/bids-validator/pull/2066
• feat: Treat directory formats like other data files by @effigies in https://github.com/bids-standard/bids-validator/pull/2064
• 'schema.rules.rules'.... booo by @rwblair in https://github.com/bids-standard/bids-validator/pull/2070
• feat: Track files referenced by other files to identify orphans by @effigies in https://github.com/bids-standard/bids-validator/pull/2057
• chore: Add .editorconfig by @effigies in https://github.com/bids-standard/bids-validator/pull/2072
• Refactor DatasetIssues and Issue classes by @rwblair in https://github.com/bids-standard/bids-validator/pull/2067
• fix(nifti): Suppress console.error during NIfTI readHeader() by @effigies in https://github.com/bids-standard/bids-validator/pull/2076
• feat: Separate output issues by subcodes by @rwblair in https://github.com/bids-standard/bids-validator/pull/2078
• fix(json): Validate all JSON fields by @effigies in https://github.com/bids-standard/bids-validator/pull/2075
• test: Add unit tests for valid and invalid filenames by @effigies in https://github.com/bids-standard/bids-validator/pull/2079
• Throw error on multiple valid inheritable files in the same directory... by @rwblair in https://github.com/bids-standard/bids-validator/pull/2080
• chore(pkg): Prepare package for publication to jsr by @effigies in https://github.com/bids-standard/bids-validator/pull/2077
• fix: Add --color options only when run through command line by @effigies in https://github.com/bids-standard/bids-validator/pull/2086
• chore: Various cleanups by @effigies in https://github.com/bids-standard/bids-validator/pull/2085
• feat: Utilities for constructing BIDSFiles and FileTrees by @effigies in https://github.com/bids-standard/bids-validator/pull/2082
• fix(web): Generate web UI elements from new issues by @effigies in https://github.com/bids-standard/bids-validator/pull/2088
• feat: Add FileTree.get method by @effigies in https://github.com/bids-standard/bids-validator/pull/2083
• feat: Do not warn on overridden columns if meaning is unchanged by @effigies in https://github.com/bids-standard/bids-validator/pull/2084
• [js] Update all npm dependencies (2024-08-18) by @depfu in https://github.com/bids-standard/bids-validator/pull/2094
• chore(deps): bump axios from 1.7.3 to 1.7.4 by @dependabot in https://github.com/bids-standard/bids-validator/pull/2096
• rf: Use upstream context types by @effigies in https://github.com/bids-standard/bids-validator/pull/2090
• feat: Parse gzip header by @effigies in https://github.com/bids-standard/bids-validator/pull/2092
• feat: Hack around missing round() function by @effigies in https://github.com/bids-standard/bids-validator/pull/2099
• feat(cli): Add --blacklistModalities and --ignoreWarnings flags by @effigies in https://github.com/bids-standard/bids-validator/pull/2098
• feat: Parse (OME-)TIFF by @effigies in https://github.com/bids-standard/bids-validator/pull/2093
• fix: Use logger, not console, to log errors by @effigies in https://github.com/bids-standard/bids-validator/pull/2103
• feat(cli): Add configuration file by @effigies in https://github.com/bids-standard/bids-validator/pull/2100
• Add flag for validating derivatives inside /derivatives/ by @rwblair in https://github.com/bids-standard/bids-validator/pull/2102
• feat(tsv): Warn on undefined columns by @effigies in https://github.com/bids-standard/bids-validator/pull/2104
• fix: Use @libs/xml over xml2js for tiff parsing by @nellh in https://github.com/bids-standard/bids-validator/pull/2106
• [js] Update all npm dependencies (2024-08-25) by @depfu in https://github.com/bids-standard/bids-validator/pull/2109
• chore(deps): bump micromatch from 4.0.5 to 4.0.8 by @dependabot in https://github.com/bids-standard/bids-validator/pull/2110
• fix: Import schema correctly from JSR by @effigies in https://github.com/bids-standard/bids-validator/pull/2111

Full Changelog: bids-standard/bids-validator@v1.14.8...v1.14.10

v1.14.8

What's Changed

• feat: Add exists(..., 'file') for file-relative paths by @effigies in https://github.com/bids-standard/bids-validator/pull/2054
• Purge Python validator by @effigies in https://github.com/bids-standard/bids-validator/pull/2062
• Bump hed-validator to v3.15.4 by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2061
• ci: Include legacy validator build in deno web deployment by @nellh in https://github.com/bids-standard/bids-validator/pull/2060

Full Changelog: bids-standard/bids-validator@v1.14.7...v1.14.8

v1.14.7

What's Changed

• [js] Update all npm dependencies (2024-05-12) by @depfu in https://github.com/bids-standard/bids-validator/pull/1971
• [js] Update all npm dependencies (2024-05-19) by @depfu in https://github.com/bids-standard/bids-validator/pull/1972
• ci: Fix artifact name for schema web validator deployment by @nellh in https://github.com/bids-standard/bids-validator/pull/1970
• FIX: Expect multiple rule matches for events.json by @effigies in https://github.com/bids-standard/bids-validator/pull/1952
• feat: Add values to associations.bvals, fix misnamed variables by @effigies in https://github.com/bids-standard/bids-validator/pull/1955
• ENH: Validate phenotype filenames by @effigies in https://github.com/bids-standard/bids-validator/pull/1957
• Resolve remaining test failures for schema validator by @effigies in https://github.com/bids-standard/bids-validator/pull/1958
• feat(py): Base Python validator on schema instead of hard-coded regexes by @effigies in https://github.com/bids-standard/bids-validator/pull/1967
• chore(codespell): particpants ==> participants by @effigies in https://github.com/bids-standard/bids-validator/pull/1976
• chore(deps): bump tar and lerna by @dependabot in https://github.com/bids-standard/bids-validator/pull/1975
• feat(schema): Load subject data by @effigies in https://github.com/bids-standard/bids-validator/pull/1977
• [js] Update all npm dependencies (2024-05-26) by @depfu in https://github.com/bids-standard/bids-validator/pull/1980
• feat(schema): Add issue for missing dataset_description.json by @effigies in https://github.com/bids-standard/bids-validator/pull/1982
• chore(deps): bump bids-validator/spec from 0950f6d to 70d7750 by @dependabot in https://github.com/bids-standard/bids-validator/pull/1983
• Bump hed-validator to 3.14.0 by @happy5214 in https://github.com/bids-standard/bids-validator/pull/1986
• (deno) TSV type check overhaul. by @rwblair in https://github.com/bids-standard/bids-validator/pull/1987
• [js] Update all npm dependencies (2024-06-09) by @depfu in https://github.com/bids-standard/bids-validator/pull/1991
• fix: OSX and Windows tests by @effigies in https://github.com/bids-standard/bids-validator/pull/1989
• fix(expr): Use a sensible sorting function for sorted() by @effigies in https://github.com/bids-standard/bids-validator/pull/1990
• fix: Small cleanups from recent test fixes by @effigies in https://github.com/bids-standard/bids-validator/pull/1992
• feat(deno): Retrieve version from import.meta.url or git, when possible by @effigies in https://github.com/bids-standard/bids-validator/pull/1985
• Provide safe.directory=* for git describe to prevent git freaking out by @yarikoptic in https://github.com/bids-standard/bids-validator/pull/1996
• chore(ci): Tag deno builds with full version, truncate history by @effigies in https://github.com/bids-standard/bids-validator/pull/1993
• feat(tsv): Accept column definitions in schema entries by @effigies in https://github.com/bids-standard/bids-validator/pull/2003
• chore(deps): bump braces from 3.0.2 to 3.0.3 by @dependabot in https://github.com/bids-standard/bids-validator/pull/2002
• [js] Update all npm dependencies (2024-06-16) by @depfu in https://github.com/bids-standard/bids-validator/pull/2004
• Add support for the XPCT suffix in microscopy by @chourroutm in https://github.com/bids-standard/bids-validator/pull/1973
• fix(legacy): Prevent prototype pollution (global property) from crashing sidecar merges by @nellh in https://github.com/bids-standard/bids-validator/pull/2015
• fix(legacy): Combine sidecars with a method resilient to Object namespace pollution by @effigies in https://github.com/bids-standard/bids-validator/pull/2016
• Completely rewrite HED support by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2014
• chore(deps-dev): bump ws from 8.13.0 to 8.17.1 by @dependabot in https://github.com/bids-standard/bids-validator/pull/2005
• chore(deps): bump docker/build-push-action from 5 to 6 by @dependabot in https://github.com/bids-standard/bids-validator/pull/2011
• [js] Update all npm dependencies (2024-07-11) by @depfu in https://github.com/bids-standard/bids-validator/pull/2009
• Improve test coverage for code added in #2014 by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2018
• [js] Update all npm dependencies (2024-07-21) by @depfu in https://github.com/bids-standard/bids-validator/pull/2023
• [js] Update all npm dependencies (2024-07-28) by @depfu in https://github.com/bids-standard/bids-validator/pull/2024
• chore: deno fmt schema validator by @effigies in https://github.com/bids-standard/bids-validator/pull/2026
• feat(expr): Allow sorted to take a method argument, enabling numeric and lexical sorting by @effigies in https://github.com/bids-standard/bids-validator/pull/2022
• feat(json): Warn on missing RECOMMENDED metadata by @effigies in https://github.com/bids-standard/bids-validator/pull/2027
• fix(tsv): Check explicit formats for column contents when defined by @effigies in https://github.com/bids-standard/bids-validator/pull/2025
• fix(context): Find sidecars when directories share prefixes by @effigies in https://github.com/bids-standard/bids-validator/pull/2028
• fix(summary): Verify context.json is an object before looking up keys by @effigies in https://github.com/bids-standard/bids-validator/pull/2029
• fix(context): Add file size to context, fixes README_FILE_SMALL by @effigies in https://github.com/bids-standard/bids-validator/pull/2030
• Generate JSON schema's from spec schema to validate values in sidecars. by @rwblair in https://github.com/bids-standard/bids-validator/pull/2020
• fix(web): Use JSON.stringify when Deno.inspect is unavailable by @effigies in https://github.com/bids-standard/bids-validator/pull/2032
• Bump hed-validator to v3.15.2 by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2034
• rf(context): Refactor inheritance principle to walk from leaf to root by @effigies in https://github.com/bids-standard/bids-validator/pull/2035
• fix(nifti): Load NIfTI headers by @effigies in https://github.com/bids-standard/bids-validator/pull/2036
• rf(json-schema): Factor JSON schema validation out of context.dataset by @effigies in https://github.com/bids-standard/bids-validator/pull/2033
• feat(eval): Distinguish JSON rules from sidecar rules by @effigies in https://github.com/bids-standard/bids-validator/pull/2031
• fix(expr): Coerce arguments to min/max to numbers by @effigies in https://github.com/bids-standard/bids-validator/pull/2038
• feat(context): Detect duplicate columns when parsing TSV files by @effigies in https://github.com/bids-standard/bids-validator/pull/2039
• Bump hed-validator to v3.15.3 by @happy5214 in https://github.com/bids-standard/bids-validator/pull/2041
• hack: Censor ".parent" fields which can lead to circular references by @effigies in https://github.com/bids-standard/bids-validator/pull/2040
• HED Validator integration into bids schema based validator. by @rwblair in https://github.com/bids-standard/bids-validator/pull/1648
• fix(expr): Escape backslashes in checks before interpolating by @effigies in https://github.com/bids-standard/bids-validator/pull/2042
• chore(deps): bump bids-validator/tests/data/bids-examples from 401f4cf to ad9db4b by @dependabot in https://github.com/bids-standard/bids-validator/pull/2045
• chore(deps): bump bids-validator/spec from 9f2a7a8 to fdca7ec by @dependabot in https://github.com/bids-standard/bids-validator/pull/2046
• 🚨 [security] [js] Update @aws-sdk/client-s3 3.614.0 → 3.621.0 (minor) by @depfu in https://github.com/bids-standard/bids-validator/pull/2047
• feat(tsv): Memoize TSV loading with a tiered cache, deleting after leaving a directory by @effigies in https://github.com/bids-standard/bids-validator/pull/2052
• fix(channels): Add needed fields to context.associations.channels by @effigies in https://github.com/bids-standard/bids-validator/pull/2051
• fix(bvec): Improve empty row detection, stop preemptive numeric conversion by @effigies in https://github.com/bids-standard/bids-validator/pull/2053
• Cross reference local and schema issue codes by @rwblair in https://github.com/bids-standard/bids-validator/pull/2048
• [js] Update all npm dependencies (2024-08-04) by @depfu in https://github.com/bids-standard/bids-validator/pull/2055

New Contributors

• @chourroutm made their first contribution in https://github.com/bids-standard/bids-validator/pull/1973

Full Changelog: bids-standard/bids-validator@v1.14.6...v1.14.7

v1.14.6

What's Changed

• chore: Remove schema experiment from legacy validator by @nellh in https://github.com/bids-standard/bids-validator/pull/1932
• fix(schema): Fix relative import path "ignore" not prefixed error for standalone builds by @nellh in https://github.com/bids-standard/bids-validator/pull/1936
• fix: Preserve key properties when using spread to copy BIDSFile objects in browser environments by @nellh in https://github.com/bids-standard/bids-validator/pull/1928
• FIX: Load JSON contents into context eagerly by @effigies in https://github.com/bids-standard/bids-validator/pull/1938
• have exists return false on bids-uri check if string doesn't start with 'bids:' by @rwblair in https://github.com/bids-standard/bids-validator/pull/1941
• fix: Set deno validator exit code on errors by @nellh in https://github.com/bids-standard/bids-validator/pull/1944
• Pass on multiple rules.files matches from filenameIdentify to filenameValidate. by @rwblair in https://github.com/bids-standard/bids-validator/pull/1940
• Have filenameIdentify use datasetContext to determine which filename rules to use. by @rwblair in https://github.com/bids-standard/bids-validator/pull/1939
• ci: Replace web validator with schema version and link to subdirectory build of the legacy validator by @nellh in https://github.com/bids-standard/bids-validator/pull/1929
• Fix exists for derivative paths in raw datasets. by @rwblair in https://github.com/bids-standard/bids-validator/pull/1950
• Use /usr/bin/env not /bin/env as a more portable (present on OSX) by @yarikoptic in https://github.com/bids-standard/bids-validator/pull/1960
• fix(expressions): Make FileTree.contains() return true for directories by @effigies in https://github.com/bids-standard/bids-validator/pull/1956
• FIX: Start file count at 0 by @effigies in https://github.com/bids-standard/bids-validator/pull/1951
• CI: Update submodules in the usual way by @effigies in https://github.com/bids-standard/bids-validator/pull/1965
• feat(legacy): Check for required fields in PET sidecars. by @nellh in https://github.com/bids-standard/bids-validator/pull/1964
• chore(deps): bump bids-validator/spec from bd08602 to 0950f6d by @dependabot in https://github.com/bids-standard/bids-validator/pull/1961
• fix(legacy): Add missing top-level rule for UNIT1 sidecars by @bpinsard in https://github.com/bids-standard/bids-validator/pull/1966
• [js] Update all npm dependencies (2024-05-07) by @depfu in https://github.com/bids-standard/bids-validator/pull/1919
• [js] Update hed-validator 3.13.4 → 3.13.5 (patch) by @depfu in https://github.com/bids-standard/bids-validator/pull/1968
• chore(deps): bump ejs from 3.1.9 to 3.1.10 by @dependabot in https://github.com/bids-standard/bids-validator/pull/1962

New Contributors

• @bpinsard made their first contribution in https://github.com/bids-standard/bids-validator/pull/1966

Full Changelog: bids-standard/bids-validator@v1.14.5...v1.14.6

v1.14.5

What's Changed

• [js] Update all npm dependencies (2024-03-17) by @depfu in https://github.com/bids-standard/bids-validator/pull/1917
• chore(deps): bump follow-redirects from 1.15.5 to 1.15.6 by @dependabot in https://github.com/bids-standard/bids-validator/pull/1916
• Add vite web validator for the schema validator by @nellh in https://github.com/bids-standard/bids-validator/pull/1915
• chore(deps): bump bids-validator/tests/data/bids-examples from 0d60f73 to 711be5b by @dependabot in https://github.com/bids-standard/bids-validator/pull/1921
• chore(deps): bump bids-validator/spec from 5b835b0 to bd08602 by @dependabot in https://github.com/bids-standard/bids-validator/pull/1922
• FIX: Add minimum Python requirement to package metadata by @effigies in https://github.com/bids-standard/bids-validator/pull/1924

Full Changelog: bids-standard/bids-validator@v1.14.4...v1.14.5

v1.14.4

What's Changed

• Bump hed-validator dependency to v3.13.4 by @happy5214 in https://github.com/bids-standard/bids-validator/pull/1913

Full Changelog: bids-standard/bids-validator@v1.14.3...v1.14.4