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21 Open 38 Closed
21 Open 38 Closed
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Issues list

ValueError: invalid literal for int() with base 10: '48169282.0': Error while type casting for column 'pos'
#177 opened Jun 14, 2024 by IMingGarson
parse only a specific region (or chromosome)
#159 opened Aug 22, 2022 by IsmailM
VCF parsing issue with ezancestry
#158 opened Jul 9, 2022 by apriha
Change "generic" source to "unknown"
#122 opened Feb 1, 2021 by apriha 3.0.0
AttributeError: 'str' object has no attribute '_output_dir'
#120 opened Jan 17, 2021 by lakishadavid
9
Class based source readers?
#119 opened Dec 9, 2020 by afaulconbridge
1
Consolidate issues into one dataframe
#112 opened Nov 9, 2020 by apriha 3.1.0
Use Pandas nullable integer for position in for normalized snps dataframe
#109 opened Nov 7, 2020 by afaulconbridge 3.0.0
1
Optimize normalized snps dataframe dtypes
#108 opened Oct 31, 2020 by apriha 3.0.0
4
Deduplicate loci
#107 opened Oct 29, 2020 by apriha 3.1.0
Multisample VCF
#105 opened Oct 14, 2020 by kkarbasi
1
mapmygenome filter on GC.Score question Further information is requested
#95 opened Sep 20, 2020 by satishmp
2
Indel SNPs rejected due to mismapping issue
#68 opened Apr 6, 2020 by GerardManning
VCF / GVCF parsing issue
#67 opened Feb 19, 2020 by deniseho-98
5
Consider refactoring genotype column enhancement New feature or request
#45 opened Nov 28, 2019 by apriha
6
Consolidate code to resolve SNP issues enhancement New feature or request
#42 opened Nov 28, 2019 by apriha
6
Populate missing RSIDs enhancement New feature or request
#19 opened Jun 25, 2019 by apriha
Assign SNPs on chromosome 0 enhancement New feature or request
#13 opened Jun 14, 2019 by apriha
2
Use full Y chromosome reference sequence when writing VCF bug Something isn't working
#10 opened Jun 14, 2019 by apriha
Compute additional summary statistics enhancement New feature or request
#8 opened Dec 28, 2018 by apriha
Handle mtDNA FASTA data enhancement New feature or request
#5 opened Nov 19, 2017 by apriha
ProTip! Follow long discussions with comments:>50.