Supplementary code for analyzing bursts in product interarrival times. Last modification: 30 March 2018

Maciej Dobrzynski & Frank J Bruggeman Centre for Mathematics and Computer Science (CWI), Amsterdam, The Netherlands

Content of the directory: burster - C code for Gillespie simulation of the basic burst-generating model, slide - C code for Gillespie simulation of motor protein progression along the polymer chain, matlab - Matlab scripts mdloghist.m - Matlab script to produce histograms with logarithmic binning, mdburstsz.m - Matlab script to generate the burst size function.

R - Rstudio project calcBurstSzFn.R - R function to generate the burst size function. analyzeBursts.Rmd - R notebook demonstrating burst analysis using example dataset example-data-1 - Example dataset generated with ./burster.x 1 10000 1 0 0.1 0.1 10 1