Converter from PDB format to XYZ. PDB file can be read either from the Internet or from the computer. Can write xyz-file with only CA (or any others) atoms. Keep track of missing atoms. Can take the longest part without missing atoms. Exclude repeated atoms. Can choose one or several chains or models from the pdb-file.
Read Manual for more information:
$ man ./pdb2xyz.1Write in terminal:
$ git clone https://github.com/Anny-Moon/pdb2xyz
$ cd pdb2xyz/
$ sh install.sh
$ ./pdb2xyz.out 5dn7 -f CA --part