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Kainmueller Lab

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  1. PatchPerPix PatchPerPix Public

    official implementation of the PatchPerPix instance segmentation method

    Python 28 5

  2. PatchPerPix_experiments PatchPerPix_experiments Public archive

    experiments script for the PatchPerPix instance segmentation method

    Python 8 3

  3. evaluate-instance-segmentation evaluate-instance-segmentation Public

    Evaluation scripts for nuclei instance segmentation in 2d and 3d

    Python 5 2

  4. aux_cpv_loss aux_cpv_loss Public

    An Auxiliary Task for Learning Nuclei Segmentation in 3D Microscopy Images

    Python 3 1

  5. shift_equivariance_unet shift_equivariance_unet Public

    How Shift Equivariance Impacts Metric Learning for Instance Segmentation

    Jupyter Notebook 3 2

  6. arctique arctique Public

    Python 2

Repositories

Showing 10 of 27 repositories
  • CutLER Public Forked from facebookresearch/CutLER

    Code release for "Cut and Learn for Unsupervised Object Detection and Instance Segmentation" and "VideoCutLER: Surprisingly Simple Unsupervised Video Instance Segmentation"

    Kainmueller-Lab/CutLER’s past year of commit activity
    Python 0 99 0 0 Updated Dec 2, 2024
  • arctique Public
    Kainmueller-Lab/arctique’s past year of commit activity
    Python 2 GPL-3.0 0 0 1 Updated Nov 21, 2024
  • plankton-dinov2 Public Forked from facebookresearch/dinov2

    PyTorch code and models for the DINOv2 self-supervised learning method.

    Kainmueller-Lab/plankton-dinov2’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 842 1 0 Updated Nov 21, 2024
  • TW-autoencoder Public
    Kainmueller-Lab/TW-autoencoder’s past year of commit activity
    Python 0 0 0 0 Updated Jul 18, 2024
  • evaluate-instance-segmentation Public

    Evaluation scripts for nuclei instance segmentation in 2d and 3d

    Kainmueller-Lab/evaluate-instance-segmentation’s past year of commit activity
    Python 5 2 0 0 Updated Jun 12, 2024
  • fisbe Public
    Kainmueller-Lab/fisbe’s past year of commit activity
    SCSS 0 0 0 0 Updated Jun 4, 2024
  • PEERCE Public

    PEERCE, PD-L1 Expression Estimation for Rare Cancer Entities

    Kainmueller-Lab/PEERCE’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jun 3, 2024
  • ACTIS Public
    Kainmueller-Lab/ACTIS’s past year of commit activity
    Python 0 0 1 0 Updated Jan 8, 2024
  • mae3d_flylight Public Forked from facebookresearch/mae

    3d PyTorch implementation of MAE for the Flylight dataset

    Kainmueller-Lab/mae3d_flylight’s past year of commit activity
    Python 0 1,233 0 0 Updated Dec 18, 2023
  • funlib.learn.torch Public Forked from funkelab/funlib.learn.torch
    Kainmueller-Lab/funlib.learn.torch’s past year of commit activity
    Python 0 12 0 0 Updated Dec 18, 2023
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