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  1. fragment-foundation-model fragment-foundation-model Public

    Python

  2. PEsWGS-alignment-snakemake PEsWGS-alignment-snakemake Public

    Python

  3. cancer-fragment-insert-size-analysis cancer-fragment-insert-size-analysis Public

    Jupyter Notebook

  4. Lightning-AI/pytorch-lightning Lightning-AI/pytorch-lightning Public

    Pretrain, finetune ANY AI model of ANY size on multiple GPUs, TPUs with zero code changes.

    Python 28.5k 3.4k

  5. shallowHRD shallowHRD Public

    Forked from aeeckhou/shallowHRD

    This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination Deficiency of a tumor based on the number of Large-scale Gen…

    R