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add Experiment manager tools #34

Merged
merged 40 commits into from
Oct 11, 2024
Merged

add Experiment manager tools #34

merged 40 commits into from
Oct 11, 2024

Commits on Sep 3, 2024

  1. add Experiment manager tools (Expts_manager.py and Expts_manager.yaml… 

    …) to automate the setup and management of ACCESS-OM3 experiments
    @minghangli-uni
    minghangli-uni committed Sep 3, 2024
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Commits on Sep 4, 2024

  1. Update expts_manager/Expts_manager.py

    @minghangli-uni
    minghangli-uni authored Sep 4, 2024
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Commits on Sep 6, 2024

  1. Add check duplicate pbs jobs functionality; 

    force pbs jobname to be same as the control expt directory name.
    @minghangli-uni
    minghangli-uni committed Sep 6, 2024
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Commits on Sep 10, 2024

  1. Fix restartpath bug

    @minghangli-uni
    minghangli-uni committed Sep 10, 2024
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  2. code format

    @minghangli-uni
    minghangli-uni committed Sep 10, 2024
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Commits on Sep 12, 2024

  1. Update restartpath for 'rest'

    @minghangli-uni
    minghangli-uni committed Sep 12, 2024
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Commits on Sep 13, 2024

  1. Add parameter tunning for config.yaml and nuopc.runconfig

    @minghangli-uni
    minghangli-uni committed Sep 13, 2024
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  2. Add a python script to write the input configuration YAML file

    @minghangli-uni
    minghangli-uni committed Sep 13, 2024
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Commits on Sep 16, 2024

  1. Prevent duplicate restart symlink creation

    @minghangli-uni
    minghangli-uni committed Sep 16, 2024
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  2. code format

    @minghangli-uni
    minghangli-uni committed Sep 16, 2024
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Commits on Sep 19, 2024

  1. Add condition if pbs job status is F:Finished, and S: Suspended.

    @minghangli-uni
    minghangli-uni committed Sep 19, 2024
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Commits on Sep 20, 2024

  1. Support parameter tunning across different files

    @minghangli-uni
    minghangli-uni committed Sep 20, 2024
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  2. code format

    @minghangli-uni
    minghangli-uni committed Sep 20, 2024
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  3. Fix attribute error for tmp_count and group_count

    @minghangli-uni
    minghangli-uni committed Sep 20, 2024
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Commits on Sep 23, 2024

  1. refactor cross-block

    @minghangli-uni
    minghangli-uni committed Sep 23, 2024
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  2. code format

    @minghangli-uni
    minghangli-uni committed Sep 23, 2024
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Commits on Sep 24, 2024

  1. Support access-om2

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  2. Fix paths for utility tools

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  3. code format

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  4. Add checks for model selection - om2 or om3

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  5. Update Expts_manager.yaml

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  6. Update comments

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  7. Update write_Expts_manager_yaml.py and Expts_manager.yaml

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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  8. Update documentation

    @minghangli-uni
    minghangli-uni committed Sep 24, 2024
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Commits on Sep 25, 2024

  1. Update README.md

    @minghangli-uni
    minghangli-uni committed Sep 25, 2024
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Commits on Sep 26, 2024

  1. Polish restartpath and make it more readable for end users

    @minghangli-uni
    minghangli-uni committed Sep 26, 2024
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  2. Add checks for parameter groupname

    @minghangli-uni
    minghangli-uni committed Sep 26, 2024
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  3. Add checks for user-defined directory

    @minghangli-uni
    minghangli-uni committed Sep 26, 2024
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  4. Update expts_manager/README.md 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  5. Update expts_manager/Expts_manager.yaml 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  6. Update expts_manager/write_Expts_manager_yaml.py 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  7. Update expts_manager/Expts_manager.yaml 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  8. Update expts_manager/write_Expts_manager_yaml.py 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  9. Update expts_manager/write_Expts_manager_yaml.py 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  10. Update expts_manager/Expts_manager.yaml 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  11. Update expts_manager/Expts_manager.yaml 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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  12. Update expts_manager/Expts_manager.py 

    Co-authored-by: Andrew Kiss <[email protected]>
    @minghangli-uni @aekiss
    minghangli-uni and aekiss authored Sep 26, 2024
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Commits on Oct 7, 2024

  1. Add force_overwrite_tools flag

    @minghangli-uni
    minghangli-uni committed Oct 7, 2024
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Commits on Oct 11, 2024

  1. ensure proper commit hash assignment

    @minghangli-uni
    minghangli-uni committed Oct 11, 2024
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  2. code format

    @minghangli-uni
    minghangli-uni committed Oct 11, 2024
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