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Utility script for downloading bam (or other file types) from GenePattern

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AmpliconSuite/GenePatternFileDownloader

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Usage:

python main.py -j <Genepattern job number> -u <GenePattern User ID> -p <GenePattern password> -f <file extension to download> -g <GenePattern server URL>

e.g.

python main.py -j 556086 -u ted -p NotMyPassword -f bam -g https://cloud.genepattern.org/gp

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Utility script for downloading bam (or other file types) from GenePattern

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