diff --git a/12_ultima_continued/12_ultima_continued.jl b/12_ultima_continued/12_ultima_continued.jl index 72454e5b..f26a3dc0 100644 --- a/12_ultima_continued/12_ultima_continued.jl +++ b/12_ultima_continued/12_ultima_continued.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.12.21 +# v0.14.2 using Markdown using InteractiveUtils @@ -295,33 +295,13 @@ begin # Create a Basis @variables u[1:2] -# Lots of polynomials -polys = Operation[1] - -for i ∈ 1:5 - push!(polys, u[1]^i) - push!(polys, u[2]^i) - for j ∈ i:5 - if i != j - push!(polys, (u[1]^i)*(u[2]^j)) - push!(polys, u[2]^i*u[1]^i) - end - end -end +# Polynomial and sin based -end - -# ╔═╡ d58d6d84-544e-11eb-17b8-91723456fc15 -begin -# And some other stuff -h = [cos.(u)...; sin.(u)...; polys...] -basis = Basis(h, u) +b_ = [polynomial_basis(u, 5); sin.(u)] -h -end - -# ╔═╡ 5a6dcdc8-5451-11eb-2a2f-cbc4f35844c0 -basis +basis = Basis(b_, u) + +end; # ╔═╡ 23be1198-5451-11eb-07b7-e76b21ff565a md"So, as you can see above, we just created a **Function Space** of 29 dimensions. That space include *every* possible [linear combination](https://en.wikipedia.org/wiki/Linear_combination#:~:text=From%20Wikipedia%2C%20the%20free%20encyclopedia,a%20and%20b%20are%20constants) of each dimension. And we are going to ask to SINDy to give us the simplest function that shows the same Input-Output behaviour the Neural Network just learned. @@ -382,7 +362,7 @@ unknown_eq = ODEFunction(unknown_sys) # Just the equations b = Basis((u, p, t)->unknown_eq(u, [1.; 1.], t), u) -# Retune for better parameters -> we could also use DiffEqFlux or other parameter estimation tools here. +# Retune for better parameters Ψf = SINDy(Xₙ[:, 2:end], L̂[:, 2:end], b, STRRidge(0.01), maxiter = 100, convergence_error = 1e-18) end @@ -432,8 +412,6 @@ md"""### References # ╠═03e26dea-5449-11eb-38dc-957ea73db154 # ╟─58a1294c-544c-11eb-27ca-8512bc3d5461 # ╠═b38b9410-544e-11eb-220b-5746f897b5f4 -# ╠═d58d6d84-544e-11eb-17b8-91723456fc15 -# ╠═5a6dcdc8-5451-11eb-2a2f-cbc4f35844c0 # ╟─23be1198-5451-11eb-07b7-e76b21ff565a # ╠═9de34578-5452-11eb-14cb-d5d1cdb91e63 # ╠═6fc293fa-5453-11eb-0965-e917ffac7340 diff --git a/12_ultima_continued/Manifest.toml b/12_ultima_continued/Manifest.toml index 54debe29..36aa8288 100644 --- a/12_ultima_continued/Manifest.toml +++ b/12_ultima_continued/Manifest.toml @@ -1,16 +1,16 @@ # This file is machine-generated - editing it directly is not advised [[AbstractAlgebra]] -deps = ["InteractiveUtils", "LinearAlgebra", "Markdown", "Random", "SparseArrays", "Test"] -git-tree-sha1 = "8fa03ecf25341ff3e8fb301dba3f41c6fe09952e" +deps = ["InteractiveUtils", "LinearAlgebra", "Markdown", "Random", "RandomExtensions", "SparseArrays", "Test"] +git-tree-sha1 = "75c0cb641ccbed4ee00a45099fe1b197e0317d38" uuid = "c3fe647b-3220-5bb0-a1ea-a7954cac585d" -version = "0.10.0" +version = "0.13.5" [[AbstractFFTs]] deps = ["LinearAlgebra"] -git-tree-sha1 = "051c95d6836228d120f5f4b984dd5aba1624f716" +git-tree-sha1 = "8ed9de2f1b1a9b1dee48582ad477c6e67b83eb2c" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "0.5.0" +version = "1.0.0" [[AbstractTrees]] deps = ["Markdown"] @@ -20,33 +20,63 @@ version = "0.3.3" [[Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "0fac443759fa829ed8066db6cf1077d888bb6573" +git-tree-sha1 = "ffcfa2d345aaee0ef3d8346a073d5dd03c983ebe" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "2.0.2" +version = "3.2.0" [[ArnoldiMethod]] -deps = ["DelimitedFiles", "LinearAlgebra", "Random", "SparseArrays", "StaticArrays", "Test"] -git-tree-sha1 = "2b6845cea546604fb4dca4e31414a6a59d39ddcd" +deps = ["LinearAlgebra", "Random", "StaticArrays"] +git-tree-sha1 = "f87e559f87a45bece9c9ed97458d3afe98b1ebb9" uuid = "ec485272-7323-5ecc-a04f-4719b315124d" -version = "0.0.4" +version = "0.1.0" + +[[Arpack]] +deps = ["BinaryProvider", "Libdl", "LinearAlgebra"] +git-tree-sha1 = "cd64c112638582ba4f0be9c3e20656499c508565" +uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" +version = "0.3.2" + +[[Arpack_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg"] +git-tree-sha1 = "4c31b0101997beb213a9e6c39116b052e73ca38c" +uuid = "68821587-b530-5797-8361-c406ea357684" +version = "3.8.0+0" [[ArrayInterface]] -deps = ["LinearAlgebra", "Requires", "SparseArrays"] -git-tree-sha1 = "a2b4a1b7c725297565105f98dcee04e362d955d6" +deps = ["IfElse", "LinearAlgebra", "Requires", "SparseArrays"] +git-tree-sha1 = "ee07ae00e3cc277dcfa5507ce25be522313ecc3e" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "2.12.0" +version = "3.1.1" [[ArrayLayouts]] -deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "951c3fc1ff93497c88fb1dfa893f4de55d0b38e3" +deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] +git-tree-sha1 = "191f201e8ba18a7c0747163356ab86fd545d5b92" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "0.3.8" +version = "0.6.2" + +[[Artifacts]] +deps = ["Pkg"] +git-tree-sha1 = "c30985d8821e0cd73870b17b0ed0ce6dc44cb744" +uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +version = "1.3.0" + +[[AxisAlgorithms]] +deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] +git-tree-sha1 = "a4d07a1c313392a77042855df46c5f534076fab9" +uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950" +version = "1.0.0" + +[[BFloat16s]] +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "4af69e205efc343068dc8722b8dfec1ade89254a" +uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" +version = "0.1.0" [[BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "Random", "SparseArrays"] -git-tree-sha1 = "eaf98fa821ab26c5825fa3a054db735755c335da" +git-tree-sha1 = "951aa39ebfaed6593d43fac9c55aca1c7fdcdbd6" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "0.15.15" +version = "0.16.5" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -63,57 +93,52 @@ git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058" uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" version = "0.5.10" -[[BlackBoxOptim]] -deps = ["CPUTime", "Compat", "Distributed", "Distributions", "LinearAlgebra", "Printf", "Random", "SpatialIndexing", "StatsBase"] -git-tree-sha1 = "da5cfcc08d24a43fa4e3ad67f565f17838e26fca" -uuid = "a134a8b2-14d6-55f6-9291-3336d3ab0209" -version = "0.5.0" - [[BoundaryValueDiffEq]] deps = ["BandedMatrices", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "NLsolve", "Reexport", "SparseArrays"] -git-tree-sha1 = "3f2969de608af70db755cee9d4490a7294a6afc3" +git-tree-sha1 = "fe34902ac0c3a35d016617ab7032742865756d7d" uuid = "764a87c0-6b3e-53db-9096-fe964310641d" -version = "2.5.0" +version = "2.7.1" [[Bzip2_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "5ccb0770e3d1c185a52e6d36e3ffb830639ed3d2" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "c3598e525718abcc440f69cc6d5f60dda0a1b61e" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.6+3" +version = "1.0.6+5" [[CEnum]] git-tree-sha1 = "215a9aa4a1f23fbd05b92769fdd62559488d70e9" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" version = "0.4.1" -[[CPUTime]] -git-tree-sha1 = "2dcc50ea6a0a1ef6440d6eecd0fe3813e5671f45" -uuid = "a9c8d775-2e2e-55fc-8582-045d282d599e" -version = "1.0.0" - [[CUDA]] -deps = ["AbstractFFTs", "Adapt", "BinaryProvider", "CEnum", "DataStructures", "ExprTools", "GPUArrays", "GPUCompiler", "LLVM", "Libdl", "LinearAlgebra", "Logging", "MacroTools", "NNlib", "Pkg", "Printf", "Random", "Reexport", "Requires", "SparseArrays", "Statistics", "TimerOutputs"] -git-tree-sha1 = "83bfd180e2f842f6d4ee315a6db8665e9aa0c19b" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CompilerSupportLibraries_jll", "DataStructures", "ExprTools", "GPUArrays", "GPUCompiler", "LLVM", "Libdl", "LinearAlgebra", "Logging", "MacroTools", "NNlib", "Pkg", "Printf", "Random", "Reexport", "Requires", "SparseArrays", "Statistics", "TimerOutputs"] +git-tree-sha1 = "6ccc73b2d8b671f7a65c92b5f08f81422ebb7547" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "1.3.3" +version = "2.4.1" -[[CanonicalTraits]] -deps = ["MLStyle"] -git-tree-sha1 = "e4581e3fadda3824e0df04396c85258a2107035d" -uuid = "a603d957-0e48-4f86-8fbd-0b7bc66df689" -version = "0.2.2" +[[Cairo_jll]] +deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] +git-tree-sha1 = "e2f47f6d8337369411569fd45ae5753ca10394c6" +uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" +version = "1.16.0+6" [[ChainRules]] -deps = ["ChainRulesCore", "LinearAlgebra", "Random", "Reexport", "Requires", "Statistics"] -git-tree-sha1 = "dc502a38a8578e3a3e10a93afaa8efa068e0ae98" +deps = ["ChainRulesCore", "Compat", "LinearAlgebra", "Random", "Reexport", "Requires", "Statistics"] +git-tree-sha1 = "8cb44c68fcc2a6eef1ed603110251a5cd81dd3af" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "0.7.14" +version = "0.7.52" [[ChainRulesCore]] -deps = ["MuladdMacro"] -git-tree-sha1 = "e4afc6b9ff6827e190de8f4ee81498804e40cf23" +deps = ["Compat", "LinearAlgebra", "SparseArrays"] +git-tree-sha1 = "de4f08843c332d355852721adb1592bce7924da3" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "0.9.6" +version = "0.9.29" + +[[Clustering]] +deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "SparseArrays", "Statistics", "StatsBase"] +git-tree-sha1 = "75479b7df4167267d75294d14b58244695beb2ac" +uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" +version = "0.14.2" [[CodecBzip2]] deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] @@ -129,27 +154,32 @@ version = "0.7.0" [[ColorSchemes]] deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random", "StaticArrays"] -git-tree-sha1 = "7a15e3690529fd1042f0ab954dff7445b1efc8a5" +git-tree-sha1 = "3141757b5832ee7a0386db87997ee5a23ff20f4d" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.9.0" +version = "3.10.2" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] -git-tree-sha1 = "607c0ea16cb32af49ea2976f90c0c5acbca37d21" +git-tree-sha1 = "4bffea7ed1a9f0f3d1a131bbcd4b925548d75288" uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" -version = "0.10.8" +version = "0.10.9" [[Colors]] deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Reexport"] -git-tree-sha1 = "008d6bc68dea6beb6303fdc37188cb557391ebf2" +git-tree-sha1 = "ac5f2213e56ed8a34a3dd2f681f4df1166b34929" uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" -version = "0.12.4" +version = "0.12.6" [[Combinatorics]] git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" +[[CommonSolve]] +git-tree-sha1 = "68a0743f578349ada8bc911a5cbd5a2ef6ed6d1f" +uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" +version = "0.2.0" + [[CommonSubexpressions]] deps = ["MacroTools", "Test"] git-tree-sha1 = "7b8a93dba8af7e3b42fecabf646260105ac373f7" @@ -158,15 +188,15 @@ version = "0.3.0" [[Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "083e7e5ec3ef443e9dcb6dd3fbcb815879823bfa" +git-tree-sha1 = "919c7f3151e79ff196add81d7f4e45d91bbf420b" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.14.0" +version = "3.25.0" [[CompilerSupportLibraries_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "7c4f882c41faa72118841185afc58a2eb00ef612" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "8e695f735fca77e9708e795eda62afdb869cbb70" uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "0.3.3+0" +version = "0.3.4+0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -175,83 +205,84 @@ uuid = "88cd18e8-d9cc-4ea6-8889-5259c0d15c8b" version = "0.1.2" [[ConstructionBase]] -git-tree-sha1 = "a2a6a5fea4d6f730ec4c18a76d27ec10e8ec1c50" +deps = ["LinearAlgebra"] +git-tree-sha1 = "48920211c95a6da1914a06c44ec94be70e84ffff" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.0.0" +version = "1.1.0" [[Contour]] deps = ["StaticArrays"] -git-tree-sha1 = 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"FiniteDifferences", "LinearAlgebra", "ModelingToolkit", "ProximalOperators", "QuadGK", "Statistics", "StatsBase", "Test"] -git-tree-sha1 = "b13ee13553800c1a07917264801f5bbc7b4201a8" +deps = ["Compat", "DSP", "DataInterpolations", "DiffEqBase", "DocStringExtensions", "FiniteDifferences", "LinearAlgebra", "ModelingToolkit", "ProximalOperators", "QuadGK", "Statistics", "StatsBase", "Test"] +git-tree-sha1 = "0e13e1ac1c083b223c15c49dd06ed2215390c741" repo-rev = "master" repo-url = "https://github.com/SciML/DataDrivenDiffEq.jl.git" uuid = "2445eb08-9709-466a-b3fc-47e12bd697a2" -version = "0.4.0" +version = "0.5.5" [[DataInterpolations]] -deps = ["LinearAlgebra", "Optim", "RecipesBase", "RecursiveArrayTools", "Reexport"] -git-tree-sha1 = "91e799325377a5792ec63c53a2f0a0b4e3ecdfa4" +deps = ["ChainRulesCore", "LinearAlgebra", "Optim", "RecipesBase", "RecursiveArrayTools", "Reexport"] +git-tree-sha1 = "75b89fbfa3a5be3ee10890aa6d801214dd808f96" uuid = "82cc6244-b520-54b8-b5a6-8a565e85f1d0" 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"ede535e084589ca2ed626f4179337ac7fd610e7f" +deps = ["DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "NonlinearSolve", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "UnPack"] +git-tree-sha1 = "4feea0b8e1e8ab828a78295c4de4862aa5aac589" uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb" -version = "5.24.1" +version = "5.28.4" [[DelimitedFiles]] deps = ["Mmap"] uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" [[DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "Distributed", "DocStringExtensions", "FunctionWrappers", "IterativeSolvers", "IteratorInterfaceExtensions", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "Printf", "RecipesBase", "RecursiveArrayTools", "RecursiveFactorization", "Requires", "Roots", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "TableTraits", "TreeViews", "ZygoteRules"] -git-tree-sha1 = "c25c2eb947446f4bdb4b34d08ba55c24e0674b0e" +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] +git-tree-sha1 = "7971aa5164021e495b524bdb5165774f98c739a4" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.45.1" +version = "6.57.5" [[DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "NLsolve", "OrdinaryDiffEq", "RecipesBase", "RecursiveArrayTools", "StaticArrays"] -git-tree-sha1 = "63afe1bc146559c7329b6429713916c7f9e61d2f" +git-tree-sha1 = "d4c4a3f442ab749b6b895c514b0be984c75d6d67" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "2.13.5" +version = "2.16.0" [[DiffEqFinancial]] deps = ["DiffEqBase", "DiffEqNoiseProcess", "LinearAlgebra", "Markdown", "RandomNumbers"] @@ -260,52 +291,52 @@ uuid = "5a0ffddc-d203-54b0-88ba-2c03c0fc2e67" version = "2.4.0" [[DiffEqFlux]] -deps = ["Adapt", "BlackBoxOptim", "ConsoleProgressMonitor", "DiffEqBase", "DiffEqSensitivity", "DiffResults", "Distributions", "DistributionsAD", "Flux", "ForwardDiff", "LinearAlgebra", "Logging", "LoggingExtras", "Optim", "Printf", "ProgressLogging", "RecursiveArrayTools", "Requires", "ReverseDiff", "StaticArrays", "TerminalLoggers", "Tracker", "Zygote", "ZygoteRules"] -git-tree-sha1 = "23698ac2ac47d097b931cee8b0b4fbd94dd7ffae" +deps = ["Adapt", "ConsoleProgressMonitor", "DataInterpolations", "DiffEqBase", "DiffEqSensitivity", "DiffResults", "Distributions", "DistributionsAD", "Flux", "ForwardDiff", "GalacticOptim", "LinearAlgebra", "Logging", "LoggingExtras", "Printf", "ProgressLogging", "RecursiveArrayTools", "Requires", "StaticArrays", "TerminalLoggers", "Zygote", "ZygoteRules"] +git-tree-sha1 = "7248f5c4eefd67f86e82c0c9849b2433abb32e04" uuid = "aae7a2af-3d4f-5e19-a356-7da93b79d9d0" -version = "1.21.0" +version = "1.33.0" [[DiffEqJump]] deps = ["ArrayInterface", "Compat", "DataStructures", "DiffEqBase", "FunctionWrappers", "LinearAlgebra", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "68c389b108388d09f01065cf6d6df426f126d5a0" +git-tree-sha1 = "3ec8d5eeb792897b28ef79a851d834ce1415498f" uuid = "c894b116-72e5-5b58-be3c-e6d8d4ac2b12" -version = "6.10.1" +version = "6.13.0" [[DiffEqNoiseProcess]] -deps = ["DiffEqBase", "Distributions", "LinearAlgebra", "PoissonRandom", "Random", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "StaticArrays", "Statistics"] -git-tree-sha1 = "5f8ba8bbdc8a4d6f2504c9cf34ba42a0274b7e97" +deps = ["DiffEqBase", "Distributions", "LinearAlgebra", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "StaticArrays", "Statistics"] +git-tree-sha1 = "f300e85c99c79bdd0434df097d2803ae36e6ccca" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.3.0" +version = "5.6.0" [[DiffEqPhysics]] deps = ["DiffEqBase", "DiffEqCallbacks", "ForwardDiff", "LinearAlgebra", "Printf", "Random", "RecipesBase", "RecursiveArrayTools", "Reexport", "StaticArrays"] -git-tree-sha1 = "6bf21882775dc8f7b5fd4f97989a01ab65df157f" +git-tree-sha1 = "8f23c6f36f6a6eb2cbd6950e28ec7c4b99d0e4c9" uuid = "055956cb-9e8b-5191-98cc-73ae4a59e68a" -version = "3.6.0" +version = "3.9.0" [[DiffEqSensitivity]] -deps = ["Adapt", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "Distributions", "FFTW", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Parameters", "QuadGK", "QuasiMonteCarlo", "RecursiveArrayTools", "Requires", "ReverseDiff", "Statistics", "StochasticDiffEq", "Tracker", "Zygote", "ZygoteRules"] -git-tree-sha1 = "f066b42c50e54418bb9ab06abe5b03ebbf126556" +deps = ["Adapt", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "Distributions", "FFTW", "FiniteDiff", "ForwardDiff", "GlobalSensitivity", "LinearAlgebra", "Parameters", "QuadGK", "QuasiMonteCarlo", "RecursiveArrayTools", "Reexport", "Requires", "ReverseDiff", "SharedArrays", "Statistics", "StochasticDiffEq", "Tracker", "Zygote", "ZygoteRules"] +git-tree-sha1 = "c142cbbcd80b2638407d8618aa80a275d8848300" uuid = "41bf760c-e81c-5289-8e54-58b1f1f8abe2" -version = "6.31.1" +version = "6.42.0" [[DiffResults]] deps = ["StaticArrays"] -git-tree-sha1 = "da24935df8e0c6cf28de340b958f6aac88eaa0cc" +git-tree-sha1 = "c18e98cba888c6c25d1c3b048e4b3380ca956805" uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" -version = "1.0.2" +version = "1.0.3" [[DiffRules]] deps = ["NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "eb0c34204c8410888844ada5359ac8b96292cfd1" +git-tree-sha1 = "214c3fcac57755cfda163d91c58893a8723f93e9" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.0.1" +version = "1.0.2" [[DifferentialEquations]] deps = ["BoundaryValueDiffEq", "DelayDiffEq", "DiffEqBase", "DiffEqCallbacks", "DiffEqFinancial", "DiffEqJump", "DiffEqNoiseProcess", "DiffEqPhysics", "DimensionalPlotRecipes", "LinearAlgebra", "MultiScaleArrays", "OrdinaryDiffEq", "ParameterizedFunctions", "Random", "RecursiveArrayTools", "Reexport", "SteadyStateDiffEq", "StochasticDiffEq", "Sundials"] -git-tree-sha1 = "84502233aa79c6b2d0b9d5d50d205b88a02ffd8b" +git-tree-sha1 = "221b9a427fc8970be5b65171c25f0a6ba0e1f394" uuid = "0c46a032-eb83-5123-abaf-570d42b7fbaa" -version = "6.15.0" +version = "6.16.0" [[DimensionalPlotRecipes]] deps = ["LinearAlgebra", "RecipesBase"] @@ -315,31 +346,43 @@ version = "1.2.0" [[Distances]] deps = ["LinearAlgebra", "Statistics"] -git-tree-sha1 = "bed62cc5afcff16de797a9f38fb358b74071f785" +git-tree-sha1 = "366715149014943abd71aa647a07a43314158b2d" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.9.0" +version = "0.10.2" [[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"] -git-tree-sha1 = "9c41285c57c6e0d73a21ed4b65f6eec34805f937" +deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"] +git-tree-sha1 = "0fc424e725eaec6ea3e9fa8df773bee18a1ab503" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.23.8" +version = "0.24.14" [[DistributionsAD]] -deps = ["ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "ForwardDiff", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "f7b5aa4e8bc546e20f92391c782958f8302b789d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "ForwardDiff", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "7d5962cc9cb0e5c0d4e5fe854c73a3fc0c5e308c" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.4" +version = "0.6.19" [[DocStringExtensions]] deps = ["LibGit2", "Markdown", "Pkg", "Test"] -git-tree-sha1 = "c5714d9bcdba66389612dc4c47ed827c64112997" +git-tree-sha1 = "50ddf44c53698f5e784bbebb3f4b21c5807401b1" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.2" +version = "0.8.3" + +[[EarCut_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "92d8f9f208637e8d2d28c664051a00569c01493d" +uuid = "5ae413db-bbd1-5e63-b57d-d24a61df00f5" +version = "2.1.5+1" + +[[Expat_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "1402e52fcda25064f51c77a9655ce8680b76acf0" +uuid = "2e619515-83b5-522b-bb60-26c02a35a201" +version = "2.2.7+6" [[ExponentialUtilities]] deps = ["LinearAlgebra", "Printf", "Requires", "SparseArrays"] @@ -348,9 +391,9 @@ uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" version = "1.8.0" [[ExprTools]] -git-tree-sha1 = "6f0517056812fd6aa3af23d4b70d5325a2ae4e95" +git-tree-sha1 = "10407a39b87f29d47ebaca8edbc75d7c302ff93e" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" -version = "0.1.1" +version = "0.1.3" [[EzXML]] deps = ["Printf", "XML2_jll"] @@ -365,22 +408,22 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.0" [[FFMPEG_jll]] -deps = ["Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "LAME_jll", "LibVPX_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "13a934b9e74a8722bf1786c989de346a9602e695" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "LibVPX_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "3cc57ad0a213808473eafef4845a74766242e05f" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.3.1+2" +version = "4.3.1+4" [[FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "IntelOpenMP_jll", "Libdl", "LinearAlgebra", "MKL_jll", "Reexport"] -git-tree-sha1 = "8b7c16b56936047ca41bf25effa137ae0b381ae8" +git-tree-sha1 = "1b48dbde42f307e48685fa9213d8b9f8c0d87594" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.2.4" +version = "1.3.2" [[FFTW_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "6c975cd606128d45d1df432fb812d6eb10fee00b" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "5a0d4b6a22a34d17d53543bd124f4b08ed78e8b0" uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" -version = "3.3.9+5" +version = "3.3.9+7" [[FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -389,27 +432,27 @@ version = "0.3.2" [[FileIO]] deps = ["Pkg"] -git-tree-sha1 = "1e7e88a949b52e6f7f589041bd60928322414997" +git-tree-sha1 = 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"26cc04aa-876d-5657-8c51-4c34ba976000" -version = "0.10.8" +version = "0.11.7" [[FixedPointNumbers]] deps = ["Statistics"] @@ -419,38 +462,44 @@ version = "0.8.4" [[Flux]] deps = ["AbstractTrees", "Adapt", "CUDA", "CodecZlib", "Colors", "DelimitedFiles", "Functors", "Juno", "LinearAlgebra", "MacroTools", "NNlib", "Pkg", "Printf", "Random", "Reexport", "SHA", "Statistics", "StatsBase", "Test", "ZipFile", "Zygote"] -git-tree-sha1 = "ceb09ce8510ef31fd86a791bbd0e1d72a60f27d7" +git-tree-sha1 = "c443bf5a8329573a68364106b2c29bb6938dc6f5" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.11.1" +version = "0.11.6" + +[[Fontconfig_jll]] +deps = ["Artifacts", "Bzip2_jll", "Expat_jll", "FreeType2_jll", "JLLWrappers", "Libdl", "Libuuid_jll", "Pkg", "Zlib_jll"] +git-tree-sha1 = "35895cf184ceaab11fd778b4590144034a167a2f" +uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" +version = "2.13.1+14" [[Formatting]] deps = ["Printf"] -git-tree-sha1 = "a0c901c29c0e7c763342751c0a94211d56c0de5c" +git-tree-sha1 = "8339d61043228fdd3eb658d86c926cb282ae72a8" uuid = "59287772-0a20-5a39-b81b-1366585eb4c0" -version = "0.4.1" +version = "0.4.2" [[ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "NaNMath", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "1d090099fb82223abc48f7ce176d3f7696ede36d" +git-tree-sha1 = "d48a40c0f54f29a5c8748cfb3225719accc72b77" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.12" +version = "0.10.16" [[FreeType2_jll]] -deps = ["Bzip2_jll", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "158698cb8b27eccc7a0de16b73ca7912e164d88b" +deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] +git-tree-sha1 = "cbd58c9deb1d304f5a245a0b7eb841a2560cfec6" uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" -version = "2.10.1+3" +version = "2.10.1+5" [[FriBidi_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "94e98e5597e745d9fb3094d89c7b0b754204c9dd" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "0d20aed5b14dd4c9a2453c1b601d08e1149679cc" uuid = "559328eb-81f9-559d-9380-de523a88c83c" -version = "1.0.5+4" +version = "1.0.5+6" [[FunctionWrappers]] -git-tree-sha1 = "e4813d187be8c7b993cb7f85cbf2b7bfbaadc694" +git-tree-sha1 = "241552bc2209f0fa068b6415b1942cc0aa486bcc" uuid = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" -version = "1.1.1" +version = "1.1.2" [[Functors]] deps = ["MacroTools"] @@ -462,35 +511,41 @@ version = "0.1.0" deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" -[[GLM]] -deps = ["Distributions", "LinearAlgebra", "Printf", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "StatsModels"] -git-tree-sha1 = "11d47ad2699a26d5557e265a2acf3e5c3799e83d" -uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" -version = "1.3.10" +[[GLFW_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] +git-tree-sha1 = "a1bbf700b5388bffc3d882f4f4d625cf1c714fd7" +uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" +version = "3.3.2+1" [[GPUArrays]] deps = ["AbstractFFTs", "Adapt", "LinearAlgebra", "Printf", "Random", "Serialization"] -git-tree-sha1 = "600f45500060894487832c2f00c203fe3e0cb264" +git-tree-sha1 = "f99a25fe0313121f2f9627002734c7d63b4dd3bd" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "5.1.0" +version = "6.2.0" [[GPUCompiler]] -deps = ["DataStructures", "InteractiveUtils", "LLVM", "Libdl", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "c5687a4d9ff9fcfce8700b98106d63334dcbb4fe" +deps = ["DataStructures", "InteractiveUtils", "LLVM", "Libdl", "Scratch", "Serialization", "TimerOutputs", "UUIDs"] +git-tree-sha1 = "c853c810b52a80f9aad79ab109207889e57f41ef" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.6.0" +version = "0.8.3" [[GR]] -deps = ["Base64", "DelimitedFiles", "HTTP", "JSON", "LinearAlgebra", "Printf", "Random", "Serialization", "Sockets", "Test", "UUIDs"] -git-tree-sha1 = "e26c513329675092535de20cc4bb9c579c8f85a0" +deps = ["Base64", "DelimitedFiles", "GR_jll", "HTTP", "JSON", "LinearAlgebra", "Pkg", "Printf", "Random", "Serialization", "Sockets", "Test", "UUIDs"] +git-tree-sha1 = "aaebdf5588281c2902f499b49e67953f2b409c9c" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.51.0" +version = "0.54.0" -[[GeneralizedGenerated]] -deps = ["CanonicalTraits", "DataStructures", "JuliaVariables", "MLStyle"] -git-tree-sha1 = "50e0ed8fbcd56ae2e65b9aa73394f20b30269b2d" -uuid = "6b9d7cbe-bcb9-11e9-073f-15a7a543e2eb" -version = "0.2.7" +[[GR_jll]] +deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Pkg", "Qt_jll", "Zlib_jll", "libpng_jll"] +git-tree-sha1 = "8aee6fa096b0cbdb05e71750c978b96a08c78951" +uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" +version = "0.53.0+0" + +[[GalacticOptim]] +deps = ["ArrayInterface", "ConsoleProgressMonitor", "DiffEqBase", "DiffResults", "FiniteDiff", "Flux", "ForwardDiff", "Logging", "LoggingExtras", "ModelingToolkit", "Optim", "Printf", "ProgressLogging", "Reexport", "Requires", "ReverseDiff", "TerminalLoggers", "Tracker", "Zygote"] +git-tree-sha1 = "3fd9b3aef81b50815de1c527e358e62900f961cf" +uuid = "a75be94c-b780-496d-a8a9-0878b188d577" +version = "0.4.7" [[GenericSVD]] deps = ["LinearAlgebra"] @@ -499,28 +554,62 @@ uuid = "01680d73-4ee2-5a08-a1aa-533608c188bb" version = "0.3.0" [[GeometryBasics]] -deps = ["IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "119f32f9c2b497b49cd3f7f513b358b82660294c" +deps = ["EarCut_jll", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "4d4f72691933d5b6ee1ff20e27a102c3ae99d123" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.2.15" +version = "0.3.9" + +[[Gettext_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] +git-tree-sha1 = "8c14294a079216000a0bdca5ec5a447f073ddc9d" +uuid = "78b55507-aeef-58d4-861c-77aaff3498b1" +version = "0.20.1+7" + +[[Glib_jll]] +deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE_jll", "Pkg", "Zlib_jll"] +git-tree-sha1 = "04690cc5008b38ecbdfede949220bc7d9ba26397" +uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" +version = "2.59.0+4" + +[[GlobalSensitivity]] +deps = ["Distributions", "FFTW", "ForwardDiff", "KernelDensity", "LinearAlgebra", "Parameters", "QuasiMonteCarlo", "Random", "RecursiveArrayTools", "Statistics", "StatsBase", "Trapz"] +git-tree-sha1 = "2a0e0d7501b78ab7068ba9cb7cf5ddcb6241782b" +uuid = "af5da776-676b-467e-8baf-acd8249e4f0f" +version = "1.0.0" -[[GeometryTypes]] -deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "StaticArrays"] -git-tree-sha1 = "34bfa994967e893ab2f17b864eec221b3521ba4d" -uuid = "4d00f742-c7ba-57c2-abde-4428a4b178cb" -version = "0.8.3" +[[Grisu]] +git-tree-sha1 = "03d381f65183cb2d0af8b3425fde97263ce9a995" +uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" +version = "1.0.0" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "2ac03263ce44be4222342bca1c51c36ce7566161" +deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets", "URIs"] +git-tree-sha1 = "942c1a9c750bbe79912b7bd060a420932afd35b8" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.17" +version = "0.9.3" + +[[Hwloc]] +deps = ["Hwloc_jll"] +git-tree-sha1 = "2e3d1d4ab0e7296354539b2be081f71f4b694c0b" +uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" +version = "1.2.0" + +[[Hwloc_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "1179250d910c99810d8a7ff55c50c4ed68c77a58" +uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" +version = "2.4.0+0" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "6875ae3cfcb9a50af80553d5cc825f406e8d13bc" +git-tree-sha1 = "c67e7515a11f726f44083e74f218d134396d6510" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.0" +version = "0.4.2" + +[[IfElse]] +git-tree-sha1 = "28e837ff3e7a6c3cdb252ce49fb412c8eb3caeef" +uuid = "615f187c-cbe4-4ef1-ba3b-2fcf58d6d173" +version = "0.1.0" [[Inflate]] git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" @@ -534,20 +623,26 @@ uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" version = "0.5.0" [[IntelOpenMP_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "fb8e1c7a5594ba56f9011310790e03b5384998d6" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+0" +version = "2018.0.3+2" [[InteractiveUtils]] deps = ["Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" +[[Interpolations]] +deps = ["AxisAlgorithms", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] +git-tree-sha1 = "eb1dd6d5b2275faaaa18533e0fc5f9171cec25fa" +uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" +version = "0.13.1" + [[Intervals]] deps = ["Dates", "Printf", "RecipesBase", "Serialization", "TimeZones"] -git-tree-sha1 = "9da845579d1dce4ce5118008c3fe6df17260bb46" +git-tree-sha1 = "323a38ed1952d30586d0fe03412cde9399d3618b" uuid = "d8418881-c3e1-53bb-8760-2df7ec849ed5" -version = "1.4.2" +version = "1.5.0" [[IterTools]] git-tree-sha1 = "05110a2ab1fc5f932622ffea2a003221f4782c18" @@ -556,9 +651,9 @@ version = "1.3.0" [[IterativeSolvers]] deps = ["LinearAlgebra", "Printf", "Random", "RecipesBase", "SparseArrays"] -git-tree-sha1 = "3b7e2aac8c94444947facea7cc7ca91c49169be0" +git-tree-sha1 = "6f5ef3206d9dc6510a8b8e2334b96454a2ade590" uuid = "42fd0dbc-a981-5370-80f2-aaf504508153" -version = "0.8.4" +version = "0.9.0" [[IteratorInterfaceExtensions]] git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" @@ -566,75 +661,98 @@ uuid = "82899510-4779-5014-852e-03e436cf321d" version = "1.0.0" [[JLD2]] -deps = ["CodecZlib", "DataStructures", "FileIO", "Mmap", "Pkg", "Printf", "UUIDs"] -git-tree-sha1 = "9353b717ee4e27beab4e902c92a06bb5f160d2cf" +deps = ["CodecZlib", "DataStructures", "MacroTools", "Mmap", "Pkg", "Printf", "Requires", "UUIDs"] +git-tree-sha1 = "e8c4d588007dc02a1b23442ef3d14a8d7146df97" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.1.14" +version = "0.4.1" + +[[JLLWrappers]] +git-tree-sha1 = "a431f5f2ca3f4feef3bd7a5e94b8b8d4f2f647a0" +uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" +version = "1.2.0" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "b34d7cef7b337321e97d22242c3c2b91f476748e" +git-tree-sha1 = "81690084b6198a2e1da36fcfda16eeca9f9f24e4" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.0" +version = "0.21.1" [[JSONSchema]] deps = ["HTTP", "JSON", "ZipFile"] -git-tree-sha1 = "a9ecdbc90be216912a2e3e8a8e38dc4c93f0d065" +git-tree-sha1 = "b84ab8139afde82c7c65ba2b792fe12e01dd7307" uuid = "7d188eb4-7ad8-530c-ae41-71a32a6d4692" -version = "0.3.2" +version = "0.3.3" -[[JuliaVariables]] -deps = ["MLStyle", "NameResolution"] -git-tree-sha1 = "e0fcfa0a2f6122fbe13603764c5310dde00c5593" -uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" -version = "0.2.3" +[[JpegTurbo_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "9aff0587d9603ea0de2c6f6300d9f9492bbefbd3" +uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" +version = "2.0.1+3" [[Juno]] deps = ["Base64", "Logging", "Media", "Profile"] -git-tree-sha1 = "90976c3ab792a98d240d42f9df07420ccfc60668" +git-tree-sha1 = "07cb43290a840908a771552911a6274bc6c072c7" uuid = "e5e0dc1b-0480-54bc-9374-aad01c23163d" -version = "0.8.3" +version = "0.8.4" + +[[KernelDensity]] +deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] +git-tree-sha1 = "09aeec87bdc9c1fa70d0b508dfa94a21acd280d9" +uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" +version = "0.6.2" [[LAME_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "a7999edc634307964d5651265ebf7c2e14b4ef91" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "df381151e871f41ee86cee4f5f6fd598b8a68826" uuid = "c1c5ebd0-6772-5130-a774-d5fcae4a789d" -version = "3.100.0+2" +version = "3.100.0+3" [[LLVM]] deps = ["CEnum", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "a662366a5d485dee882077e8da3e1a95a86d097f" +git-tree-sha1 = "b616937c31337576360cb9fb872ec7633af7b194" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "2.0.0" +version = "3.6.0" + +[[LZO_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "f128cd6cd05ffd6d3df0523ed99b90ff6f9b349a" +uuid = "dd4b983a-f0e5-5f8d-a1b7-129d4a5fb1ac" +version = "2.10.0+3" [[LaTeXStrings]] -git-tree-sha1 = "de44b395389b84fd681394d4e8d39ef14e3a2ea8" +git-tree-sha1 = "c7aebfecb1a60d59c0fe023a68ec947a208b1e6b" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" -version = "1.1.0" +version = "1.2.0" [[LabelledArrays]] deps = ["ArrayInterface", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "5e04374019448f8509349948ab504f117e3b575a" +git-tree-sha1 = "5e288800819c323de5897fa6d5a002bdad54baf7" uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.3.0" - -[[Lasso]] -deps = ["DSP", "Distributions", "GLM", "LinearAlgebra", "MLBase", "Random", "Reexport", "SparseArrays", "StatsBase", "StatsModels"] -git-tree-sha1 = "0130cd955a3f0a97b294d1fb117553e8ccef5092" -uuid = "b4fcebef-c861-5a0f-a7e2-ba9dc32b180a" -version = "0.5.2" +version = "1.5.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "Printf", "Requires"] -git-tree-sha1 = "864527aa4d14c893fb8c51d48ef314410c88c7b9" +git-tree-sha1 = "3a0084cec7bf157edcb45a67fac0647f88fe5eaf" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.13.5" +version = "0.14.7" [[LatinHypercubeSampling]] -deps = ["Random", "StatsBase", "Test"] -git-tree-sha1 = "f6df9a2cd3c2ee1123c39fac3cca18993fc88247" +deps = ["Random", "StableRNGs", "StatsBase", "Test"] +git-tree-sha1 = "cf0b0026bf06a096873742f550f14b71cf866400" uuid = "a5e1c1ea-c99a-51d3-a14d-a9a37257b02d" -version = "1.6.4" +version = "1.7.3" + +[[LatticeRules]] +deps = ["Random"] +git-tree-sha1 = "7f5b02258a3ca0221a6a9710b0a0a2e8fb4957fe" +uuid = "73f95e8e-ec14-4e6a-8b18-0d2e271c4e55" +version = "0.0.1" + +[[LazyArtifacts]] +deps = ["Pkg"] +git-tree-sha1 = "4bb5499a1fc437342ea9ab7e319ede5a457c0968" +uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" +version = "1.3.0" [[LeftChildRightSiblingTrees]] deps = ["AbstractTrees"] @@ -647,31 +765,73 @@ deps = ["Printf"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" [[LibVPX_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "e02378f5707d0f94af22b99e4aba798e20368f6e" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "85fcc80c3052be96619affa2fe2e6d2da3908e11" uuid = "dd192d2f-8180-539f-9fb4-cc70b1dcf69a" -version = "1.9.0+0" +version = "1.9.0+1" [[Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" +[[Libffi_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "a2cd088a88c0d37eef7d209fd3d8712febce0d90" +uuid = "e9f186c6-92d2-5b65-8a66-fee21dc1b490" +version = "3.2.1+4" + +[[Libgcrypt_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgpg_error_jll", "Pkg"] +git-tree-sha1 = "b391a18ab1170a2e568f9fb8d83bc7c780cb9999" +uuid = "d4300ac3-e22c-5743-9152-c294e39db1e4" +version = "1.8.5+4" + +[[Libglvnd_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll", "Xorg_libXext_jll"] +git-tree-sha1 = "7739f837d6447403596a75d19ed01fd08d6f56bf" +uuid = "7e76a0d4-f3c7-5321-8279-8d96eeed0f29" +version = "1.3.0+3" + +[[Libgpg_error_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "ec7f2e8ad5c9fa99fc773376cdbc86d9a5a23cb7" +uuid = "7add5ba3-2f88-524e-9cd5-f83b8a55f7b8" +version = "1.36.0+3" + [[Libiconv_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "c9d4035d7481bcdff2babf5a55525a818ef8ed8f" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "8e924324b2e9275a51407a4e06deb3455b1e359f" uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" -version = "1.16.0+5" +version = "1.16.0+7" + +[[Libmount_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "51ad0c01c94c1ce48d5cad629425035ad030bfd5" +uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" +version = "2.34.0+3" + +[[Libtiff_jll]] +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "291dd857901f94d683973cdf679984cdf73b56d0" +uuid = "89763e89-9b03-5906-acba-b20f662cd828" +version = "4.1.0+2" + +[[Libuuid_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "f879ae9edbaa2c74c922e8b85bb83cc84ea1450b" +uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" +version = "2.34.0+7" [[LightGraphs]] deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "6f85a35d2377cb2db1bc448ed0d6340d2bb1ea64" +git-tree-sha1 = "432428df5f360964040ed60418dd5601ecd240b6" uuid = "093fc24a-ae57-5d10-9952-331d41423f4d" -version = "1.3.3" +version = "1.3.5" [[LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] -git-tree-sha1 = "d6e6b2ed397a402a22e474a3f1859c8c1db82c8c" +git-tree-sha1 = "f27132e551e959b3667d8c93eae90973225032dd" uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" -version = "7.1.0" +version = "7.1.1" [[LinearAlgebra]] deps = ["Libdl"] @@ -682,44 +842,33 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[LoggingExtras]] deps = ["Dates"] -git-tree-sha1 = "03289aba73c0abc25ff0229bed60f2a4129cd15c" +git-tree-sha1 = "95e675246b58a7cb1199a90cd50a25850ff215c7" uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" -version = "0.4.2" +version = "0.4.5" [[LoopVectorization]] -deps = ["DocStringExtensions", "LinearAlgebra", "OffsetArrays", "SIMDPirates", "SLEEFPirates", "UnPack", "VectorizationBase"] -git-tree-sha1 = "c91ec40b996132c96d1392e36e36383e579eb60f" +deps = ["ArrayInterface", "DocStringExtensions", "IfElse", "LinearAlgebra", "OffsetArrays", "Requires", "SLEEFPirates", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "5684e4aafadaf668dce27f12d67df4888fa58181" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.8.24" +version = "0.11.2" [[METIS_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "3f52ed323683398498ef163a45ce998f1ceca363" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "2dc1a9fc87e57e32b1fc186db78811157b30c118" uuid = "d00139f3-1899-568f-a2f0-47f597d42d70" -version = "5.1.0+4" +version = "5.1.0+5" [[MKL_jll]] -deps = ["IntelOpenMP_jll", "Libdl", "Pkg"] -git-tree-sha1 = "eb540ede3aabb8284cb482aa41d00d6ca850b1f8" +deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] +git-tree-sha1 = "c253236b0ed414624b083e6b72bfe891fbd2c7af" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2020.2.254+0" - -[[MLBase]] -deps = ["IterTools", "Random", "Reexport", "StatsBase", "Test"] -git-tree-sha1 = "f63a8d37429568b8c4384d76c4a96fc2897d6ddf" -uuid = "f0e99cf1-93fa-52ec-9ecc-5026115318e0" -version = "0.8.0" - -[[MLStyle]] -git-tree-sha1 = "937eda9ce36fcce082a42edd7181c8d23f4eb550" -uuid = "d8e11817-5142-5d16-987a-aa16d5891078" -version = "0.4.6" +version = "2021.1.1+1" [[MacroTools]] deps = ["Markdown", "Random"] -git-tree-sha1 = "f7d2e3f654af75f01ec49be82c231c382214223a" +git-tree-sha1 = "6a8a2a625ab0dea913aba95c11370589e0239ff0" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.5" +version = "0.5.6" [[Markdown]] deps = ["Base64"] @@ -727,9 +876,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "JSON", "JSONSchema", "LinearAlgebra", "MutableArithmetics", "OrderedCollections", "SparseArrays", "Test", "Unicode"] -git-tree-sha1 = "cd2049c055c7d192a235670d50faa375361624ba" +git-tree-sha1 = 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"Libdl", "LightGraphs", "LinearAlgebra", "MacroTools", "NaNMath", "RecursiveArrayTools", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SafeTestsets", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicUtils", "TreeViews", "UnPack", "Unitful"] +git-tree-sha1 = "e6b321ee517d7a488a3bd6dbbbe11c524085c7d3" uuid = "961ee093-0014-501f-94e3-6117800e7a78" -version = "3.17.0" +version = "5.6.3" [[MuladdMacro]] git-tree-sha1 = "c6190f9a7fc5d9d5915ab29f2134421b12d24a68" @@ -792,122 +941,158 @@ git-tree-sha1 = "258f3be6770fe77be8870727ba9803e236c685b8" uuid = "f9640e96-87f6-5992-9c3b-0743c6a49ffa" version = "1.8.1" +[[MultivariateStats]] +deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsBase"] +git-tree-sha1 = "8d958ff1854b166003238fe191ec34b9d592860a" +uuid = "6f286f6a-111f-5878-ab1e-185364afe411" +version = "0.8.0" + [[MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = 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"Statistics"] +git-tree-sha1 = "df42d0816edfc24f5b82a728f46381613c4dff79" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.7.4" +version = "0.7.14" [[NaNMath]] -git-tree-sha1 = "c84c576296d0e2fbb3fc134d3e09086b3ea617cd" +git-tree-sha1 = "bfe47e760d60b82b66b61d2d44128b62e3a369fb" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.4" - -[[NameResolution]] -deps = ["PrettyPrint"] -git-tree-sha1 = "1a0fa0e9613f46c9b8c11eee38ebb4f590013c5e" -uuid = "71a1bf82-56d0-4bbc-8a3c-48b961074391" -version = "0.1.5" +version = "0.3.5" + +[[NearestNeighbors]] +deps = ["Distances", "StaticArrays"] +git-tree-sha1 = "9afd724797039125e8e2cc362098f01dab60bc3a" +uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" +version = "0.4.8" + +[[NonlinearSolve]] +deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] +git-tree-sha1 = 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[[PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "e18e0e51ff07bf92bb7e06dcb9c082a4e125e20c" +git-tree-sha1 = "ae9a295ac761f64d8c2ec7f9f24d21eb4ffba34d" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.0.5" +version = "1.0.10" [[Plots]] -deps = ["Base64", "Contour", "Dates", "FFMPEG", "FixedPointNumbers", "GR", "GeometryBasics", "GeometryTypes", "JSON", "LinearAlgebra", "Measures", "NaNMath", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "Requires", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs"] -git-tree-sha1 = "8c22b5e0b625bda0e784d60805a4cabea8cbf128" +deps = ["Base64", "Contour", "Dates", "FFMPEG", "FixedPointNumbers", "GR", "GeometryBasics", "JSON", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs"] +git-tree-sha1 = "7ecf7d0207e7208a5cad9fd3bd357f5d5eb16044" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.6.0" +version = "1.10.5" [[PoissonRandom]] deps = ["Random", "Statistics", "Test"] @@ -939,20 +1124,15 @@ version = "0.4.0" [[Polynomials]] deps = ["Intervals", "LinearAlgebra", "OffsetArrays", "RecipesBase"] -git-tree-sha1 = "a71adbcaf8e861b7871a0473c0b8c749073281d4" +git-tree-sha1 = "1c6c5b0c3713738d6b987903c529d80622c37e07" uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" -version = "1.1.5" +version = "1.2.0" [[PositiveFactorizations]] -deps = ["LinearAlgebra", "Test"] -git-tree-sha1 = "127c47b91990c101ee3752291c4f45640eeb03d1" +deps = ["LinearAlgebra"] +git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20" uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" -version = "0.2.3" - -[[PrettyPrint]] -git-tree-sha1 = "632eb4abab3449ab30c5e1afaa874f0b98b586e4" -uuid = "8162dcfd-2161-5ef2-ae6c-7681170c5f98" -version = "0.2.0" +version = "0.2.4" [[Printf]] deps = ["Unicode"] @@ -964,21 +1144,27 @@ uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" [[ProgressLogging]] deps = ["Logging", "SHA", "UUIDs"] -git-tree-sha1 = "59398022b661b6fd569f25de6b18fde39843196a" +git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539" uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c" -version = "0.1.3" +version = "0.1.4" [[ProgressMeter]] deps = ["Distributed", "Printf"] -git-tree-sha1 = "2de4cddc0ceeddafb6b143b5b6cd9c659b64507c" +git-tree-sha1 = "6e9c89cba09f6ef134b00e10625590746ba1e036" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "1.3.2" +version = "1.5.0" [[ProximalOperators]] deps = ["IterativeSolvers", "LinearAlgebra", "OSQP", "SparseArrays", "SuiteSparse", "TSVD"] -git-tree-sha1 = "796a1aa8597cf326eec3301cf00b18830326b7d7" +git-tree-sha1 = "5180893d3d19e23595e4aaf8074cec85812cac57" uuid = "a725b495-10eb-56fe-b38b-717eba820537" -version = "0.11.0" +version = "0.13.0" + +[[Qt_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] +git-tree-sha1 = "7760cfea90bec61814e31dfb204fa4b81bba7b57" +uuid = "ede63266-ebff-546c-83e0-1c6fb6d0efc8" +version = "5.15.2+1" [[QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -987,10 +1173,10 @@ uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" version = "2.4.1" [[QuasiMonteCarlo]] -deps = ["Distributions", "LatinHypercubeSampling", "Sobol"] -git-tree-sha1 = "b90f9ff53b4c1f14eee512626cd8e7f9791b20a2" +deps = ["Distributions", "LatinHypercubeSampling", "LatticeRules", "Sobol"] +git-tree-sha1 = "3a23b68992061c9c7aa359db0d592229f55b6eb1" uuid = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b" -version = "0.2.0" +version = "0.2.2" [[REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets"] @@ -1000,58 +1186,80 @@ uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" deps = ["Serialization"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" +[[Random123]] +deps = ["Libdl", "Random", "RandomNumbers"] +git-tree-sha1 = "7c6710c8198fd4444b5eb6a3840b7d47bd3593c5" +uuid = "74087812-796a-5b5d-8853-05524746bad3" +version = "1.3.1" + +[[RandomExtensions]] +deps = ["Random", "SparseArrays"] +git-tree-sha1 = "062986376ce6d394b23d5d90f01d81426113a3c9" +uuid = "fb686558-2515-59ef-acaa-46db3789a887" +version = "0.4.3" + [[RandomNumbers]] deps = ["Random", "Requires"] git-tree-sha1 = "441e6fc35597524ada7f85e13df1f4e10137d16f" uuid = "e6cf234a-135c-5ec9-84dd-332b85af5143" version = "1.4.0" +[[Ratios]] +git-tree-sha1 = "37d210f612d70f3f7d57d488cb3b6eff56ad4e41" +uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" +version = "0.4.0" + [[RecipesBase]] -git-tree-sha1 = "58de8f7e33b7fda6ee39eff65169cd1e19d0c107" +git-tree-sha1 = "b3fb709f3c97bfc6e948be68beeecb55a0b340ae" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.0.2" +version = "1.1.1" [[RecipesPipeline]] deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase"] -git-tree-sha1 = "84ff6ab4187fb812522e7e3e6447107110171e62" +git-tree-sha1 = "c4d54a78e287de7ec73bbc928ce5eb3c60f80b24" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.1.12" +version = "0.3.1" [[RecursiveArrayTools]] deps = ["ArrayInterface", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "71a0a21303649ef213f7af81da8c6c371fa37bf6" +git-tree-sha1 = "271a36e18c8806332b7bd0f57e50fcff0d428b11" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.6.0" +version = "2.11.0" [[RecursiveFactorization]] -deps = ["LinearAlgebra", "LoopVectorization", "VectorizationBase"] -git-tree-sha1 = "4ca0bdad1d69abbd59c35af89a9a2ab6cd5ef0f1" +deps = ["LinearAlgebra", "LoopVectorization"] +git-tree-sha1 = "20f0ad1b2760da770d31be71f777740d25807631" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.1.4" +version = "0.1.11" [[Reexport]] -deps = ["Pkg"] -git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0" +git-tree-sha1 = "57d8440b0c7d98fc4f889e478e80f268d534c9d5" uuid = "189a3867-3050-52da-a836-e630ba90ab69" -version = "0.2.0" +version = "1.0.0" [[Requires]] deps = ["UUIDs"] -git-tree-sha1 = "d37400976e98018ee840e0ca4f9d20baa231dc6b" +git-tree-sha1 = "cfbac6c1ed70c002ec6361e7fd334f02820d6419" uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "1.0.1" +version = "1.1.2" [[ResettableStacks]] deps = ["StaticArrays"] -git-tree-sha1 = "d19e9c93de6020a96dbb2820567c78d0ab8f7248" +git-tree-sha1 = "622b3e491fb0a85fbfeed6f17dc320a9f46d8929" uuid = "ae5879a3-cd67-5da8-be7f-38c6eb64a37b" -version = "1.0.0" +version = "1.1.0" [[ReverseDiff]] deps = ["DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] -git-tree-sha1 = "a3a2fbc8af1fc993aca48ba01484444bbeb39bf7" +git-tree-sha1 = "ca062d55a167a81909772a325932e72c389f9724" uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" -version = "1.4.2" +version = "1.5.0" + +[[Richardson]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "e03ca566bec93f8a3aeb059c8ef102f268a38949" +uuid = "708f8203-808e-40c0-ba2d-98a6953ed40d" +version = "1.4.0" [[Rmath]] deps = ["Random", "Rmath_jll"] @@ -1065,26 +1273,20 @@ git-tree-sha1 = "d76185aa1f421306dec73c057aa384bad74188f0" uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" version = "0.2.2+1" -[[Roots]] -deps = ["Printf"] -git-tree-sha1 = "1211c7c1928c1ed29cdcef65979b7a791e3b9fbe" -uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "1.0.5" +[[RuntimeGeneratedFunctions]] +deps = ["ExprTools", "SHA", "Serialization"] +git-tree-sha1 = "e02f14dfe3a8d3b8fc92ca80c1882bfdbc015e07" +uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" +version = "0.5.1" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" -[[SIMDPirates]] -deps = ["VectorizationBase"] -git-tree-sha1 = "26ccdd1466f3071e27e81b43216ea238b62c0c42" -uuid = "21efa798-c60a-11e8-04d3-e1a92915a26a" -version = "0.8.24" - [[SLEEFPirates]] -deps = ["Libdl", "SIMDPirates", "VectorizationBase"] -git-tree-sha1 = "67ae90a18aa8c22bf159318300e765fbd89ddf6e" +deps = ["IfElse", "Libdl", "VectorizationBase"] +git-tree-sha1 = "ab6194c92dcf38036cd9513e4ab12cd76a613da1" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.5.5" +version = "0.6.10" [[SafeTestsets]] deps = ["Test"] @@ -1092,23 +1294,42 @@ git-tree-sha1 = "36ebc5622c82eb9324005cc75e7e2cc51181d181" uuid = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f" version = "0.0.1" +[[SciMLBase]] +deps = ["ArrayInterface", "CommonSolve", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] +git-tree-sha1 = "92a3f1d17a2656e55d731ef250818367fd0536fa" +uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" +version = "1.7.3" + +[[Scratch]] +deps = ["Dates"] +git-tree-sha1 = "ad4b278adb62d185bbcb6864dc24959ab0627bf6" +uuid = "6c6a2e73-6563-6170-7368-637461726353" +version = "1.0.3" + +[[SentinelArrays]] +deps = ["Dates", "Random"] +git-tree-sha1 = "6ccde405cf0759eba835eb613130723cb8f10ff9" +uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" +version = "1.2.16" + [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" +[[Setfield]] +deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] +git-tree-sha1 = "d5640fc570fb1b6c54512f0bd3853866bd298b3e" +uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" +version = "0.7.0" + [[SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383" -[[ShiftedArrays]] -git-tree-sha1 = "22395afdcf37d6709a5a0766cc4a5ca52cb85ea0" -uuid = "1277b4bf-5013-50f5-be3d-901d8477a67a" -version = "1.0.0" - [[Showoff]] -deps = ["Dates"] -git-tree-sha1 = "e032c9df551fb23c9f98ae1064de074111b7bc39" +deps = ["Dates", "Grisu"] +git-tree-sha1 = "ee010d8f103468309b8afac4abb9be2e18ff1182" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" -version = "0.3.1" +version = "0.3.2" [[SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -1137,27 +1358,27 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[SparseDiffTools]] deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "LightGraphs", "LinearAlgebra", "Requires", "SparseArrays", "VertexSafeGraphs"] -git-tree-sha1 = "69de355cb5e2b9a0e89f383c1762bba5ae70b580" +git-tree-sha1 = "d05bc362e3fa1b0e2361594a706fc63ffbd140f3" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.10.0" - -[[SpatialIndexing]] -deps = ["Printf", "Random", "Test"] -git-tree-sha1 = "7bc6fc5c363aae476ec2c8bc527aef104b90c779" -uuid = "d4ead438-fe20-5cc5-a293-4fd39a41b74c" -version = "0.1.2" +version = "1.13.0" [[SpecialFunctions]] -deps = ["OpenSpecFun_jll"] -git-tree-sha1 = "d8d8b8a9f4119829410ecd706da4cc8594a1e020" +deps = ["ChainRulesCore", "OpenSpecFun_jll"] +git-tree-sha1 = "5919936c0e92cff40e57d0ddf0ceb667d42e5902" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "0.10.3" +version = "1.3.0" + +[[StableRNGs]] +deps = ["Random", "Test"] +git-tree-sha1 = "3be7d49667040add7ee151fefaf1f8c04c8c8276" +uuid = "860ef19b-820b-49d6-a774-d7a799459cd3" +version = "1.0.0" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "016d1e1a00fabc556473b07161da3d39726ded35" +git-tree-sha1 = "9da72ed50e94dbff92036da395275ed114e04d49" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "0.12.4" +version = "1.0.1" [[Statistics]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1165,39 +1386,39 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics"] -git-tree-sha1 = "19bfcb46245f69ff4013b3df3b977a289852c3a1" +git-tree-sha1 = "400aa43f7de43aeccc5b2e39a76a79d262202b76" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.32.2" +version = "0.33.3" [[StatsFuns]] deps = ["Rmath", "SpecialFunctions"] -git-tree-sha1 = "04a5a8e6ab87966b43f247920eab053fd5fdc925" +git-tree-sha1 = "3b9f665c70712af3264b61c27a7e1d62055dafd1" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.5" +version = "0.9.6" -[[StatsModels]] -deps = ["DataAPI", "DataStructures", "Distributions", "LinearAlgebra", "Printf", "ShiftedArrays", "SparseArrays", "StatsBase", "Tables"] -git-tree-sha1 = "3ac2e9193a530adf67025ce285559f01228b9612" -uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" -version = "0.6.13" +[[StatsPlots]] +deps = ["Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "7c88f73b759ae16a4a1af8bda7a9563471a7baf5" +uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" +version = "0.14.19" [[SteadyStateDiffEq]] -deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport"] -git-tree-sha1 = "75f258513b7ef8b235876f4cf146577ffd545094" +deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"] +git-tree-sha1 = "9b908c7a5933b8ec7c2da44a477f74127baa2ce9" uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" -version = "1.5.1" +version = "1.6.1" [[StochasticDiffEq]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqJump", "DiffEqNoiseProcess", "FillArrays", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "ea25d14313775646f9aa4b2158156fb1b3815001" +git-tree-sha1 = "e207b556e30d79280fa8bac1780b75af11af955e" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.25.0" +version = "6.32.1" [[StructArrays]] deps = ["Adapt", "DataAPI", "Tables"] -git-tree-sha1 = "8099ed9fb90b6e754d6ba8c6ed8670f010eadca0" +git-tree-sha1 = "26ea43b4be7e919a2390c3c0f824e7eb4fc19a0a" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.4.4" +version = "0.5.0" [[SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -1211,9 +1432,9 @@ version = "5.4.0+9" [[Sundials]] deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SparseArrays", "Sundials_jll"] -git-tree-sha1 = "0fc68b00d45b3882174d21a5841a1049769b9fd8" +git-tree-sha1 = "28db9e1a8fdd1b8e95cee064a6c2066897cf39c5" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" -version = "4.2.6" +version = "4.4.1" [[Sundials_jll]] deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"] @@ -1222,16 +1443,22 @@ uuid = "fb77eaff-e24c-56d4-86b1-d163f2edb164" version = "5.2.0+1" [[SymbolicUtils]] -deps = ["AbstractAlgebra", "Combinatorics", "DataStructures", "NaNMath", "SpecialFunctions", "TimerOutputs"] -git-tree-sha1 = "3cd0b83054bd456ac5c8740900ef4d1f830462c0" +deps = ["AbstractAlgebra", "AbstractTrees", "Combinatorics", "DataStructures", "IfElse", "LabelledArrays", "NaNMath", "SparseArrays", "SpecialFunctions", "StaticArrays", "TimerOutputs"] +git-tree-sha1 = "4df514f3c4821247f447791a950619a931195c00" uuid = "d1185830-fcd6-423d-90d6-eec64667417b" -version = "0.5.1" +version = "0.8.3" [[TSVD]] -deps = ["Adapt", "LinearAlgebra"] -git-tree-sha1 = "4c6caaa3d6658009a22c8c8f1e9de9e2bd7eef25" +deps = ["LinearAlgebra", "SparseArrays", "Test"] +git-tree-sha1 = "714329116fe2765856c018791470dcc1549f49e4" uuid = "9449cd9e-2762-5aa3-a617-5413e99d722e" -version = "0.4.0" +version = "0.3.0" + +[[TableOperations]] +deps = ["SentinelArrays", "Tables", "Test"] +git-tree-sha1 = "a7cf690d0ac3f5b53dd09b5d613540b230233647" +uuid = "ab02a1b2-a7df-11e8-156e-fb1833f50b87" +version = "1.0.0" [[TableTraits]] deps = ["IteratorInterfaceExtensions"] @@ -1241,37 +1468,43 @@ version = "1.0.0" [[Tables]] deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"] -git-tree-sha1 = "b7f762e9820b7fab47544c36f26f54ac59cf8abf" +git-tree-sha1 = "a716dde43d57fa537a19058d044b495301ba6565" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.0.5" +version = "1.3.2" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "cbea752b5eef52a3e1188fb31580c3e4fa0cbc35" +git-tree-sha1 = "e185a19bb9172f0cf5bc71233fab92a46f7ae154" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.2" +version = "0.1.3" [[Test]] deps = ["Distributed", "InteractiveUtils", "Logging", "Random"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" +[[ThreadingUtilities]] +deps = ["VectorizationBase"] +git-tree-sha1 = "e3032c97b183e6e2baf4d2cc4fe60c4292a4a707" +uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" +version = "0.2.5" + [[TimeZones]] deps = ["Dates", "EzXML", "Mocking", "Pkg", "Printf", "RecipesBase", "Serialization", "Unicode"] -git-tree-sha1 = "338ddbb2b9b50a9a423ba6c3fad1824553535988" +git-tree-sha1 = "4ba8a9579a243400db412b50300cd61d7447e583" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.3.2" +version = "1.5.3" [[TimerOutputs]] deps = ["Printf"] -git-tree-sha1 = "f458ca23ff80e46a630922c555d838303e4b9603" +git-tree-sha1 = "3318281dd4121ecf9713ce1383b9ace7d7476fdd" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.6" +version = "0.5.7" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "LinearAlgebra", "MacroTools", "NNlib", "NaNMath", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "5ecb538f7a537377f95fa6cc2690bf208192f35a" +git-tree-sha1 = "3086721cf3007c4b335f30d8628446a35f32adb5" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.11" +version = "0.2.15" [[TranscodingStreams]] deps = ["Random", "Test"] @@ -1279,12 +1512,22 @@ git-tree-sha1 = "7c53c35547de1c5b9d46a4797cf6d8253807108c" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" version = "0.9.5" +[[Trapz]] +git-tree-sha1 = "aff96deaaa38e3b52a5af1dd3da376d49bf6ec9a" +uuid = "592b5752-818d-11e9-1e9a-2b8ca4a44cd1" +version = "2.0.2" + [[TreeViews]] deps = ["Test"] git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" version = "0.3.0" +[[URIs]] +git-tree-sha1 = "7855809b88d7b16e9b029afd17880930626f54a2" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.2.0" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1299,15 +1542,15 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" [[Unitful]] deps = ["ConstructionBase", "LinearAlgebra", "Random"] -git-tree-sha1 = "75d9fcb9c5dba40f746a1bee368393ffd78084b0" +git-tree-sha1 = "fdfbea79b5b9a305bf226eb4730321f603281290" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.4.0" +version = "1.6.0" [[VectorizationBase]] -deps = ["CpuId", "Libdl", "LinearAlgebra"] -git-tree-sha1 = "c2a34c8065076a867fc36522c1a3441156a63445" +deps = ["ArrayInterface", "Hwloc", "IfElse", "Libdl", "LinearAlgebra"] +git-tree-sha1 = "338930400f561a120b9b317a456c7c1cd62eac13" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.12.32" +version = "0.18.10" [[VertexSafeGraphs]] deps = ["LightGraphs"] @@ -1315,62 +1558,236 @@ git-tree-sha1 = "b9b450c99a3ca1cc1c6836f560d8d887bcbe356e" uuid = "19fa3120-7c27-5ec5-8db8-b0b0aa330d6f" version = "0.1.2" +[[Wayland_jll]] +deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"] +git-tree-sha1 = "dc643a9b774da1c2781413fd7b6dcd2c56bb8056" +uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89" +version = "1.17.0+4" + +[[Wayland_protocols_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll"] +git-tree-sha1 = "2839f1c1296940218e35df0bbb220f2a79686670" +uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" +version = "1.18.0+4" + +[[Widgets]] +deps = ["Colors", "Dates", "Observables", "OrderedCollections"] +git-tree-sha1 = "fc0feda91b3fef7fe6948ee09bb628f882b49ca4" +uuid = "cc8bc4a8-27d6-5769-a93b-9d913e69aa62" +version = "0.6.2" + +[[WoodburyMatrices]] +deps = ["LinearAlgebra", "SparseArrays"] +git-tree-sha1 = "59e2ad8fd1591ea019a5259bd012d7aee15f995c" +uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6" +version = "0.5.3" + [[XML2_jll]] -deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "432d91f45e950f2f2bda5c0f4e2b938c14493af9" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] +git-tree-sha1 = "be0db24f70aae7e2b89f2f3092e93b8606d659a6" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.9.10+1" +version = "2.9.10+3" + +[[XSLT_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Pkg", "XML2_jll"] +git-tree-sha1 = "2b3eac39df218762d2d005702d601cd44c997497" +uuid = "aed1982a-8fda-507f-9586-7b0439959a61" +version = "1.1.33+4" + +[[Xorg_libX11_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] +git-tree-sha1 = "5be649d550f3f4b95308bf0183b82e2582876527" +uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc" +version = "1.6.9+4" + +[[Xorg_libXau_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e" +uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec" +version = "1.0.9+4" + +[[Xorg_libXcursor_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"] +git-tree-sha1 = "12e0eb3bc634fa2080c1c37fccf56f7c22989afd" +uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724" +version = "1.2.0+4" + +[[Xorg_libXdmcp_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4" +uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05" +version = "1.1.3+4" + +[[Xorg_libXext_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] +git-tree-sha1 = "b7c0aa8c376b31e4852b360222848637f481f8c3" +uuid = "1082639a-0dae-5f34-9b06-72781eeb8cb3" +version = "1.3.4+4" + +[[Xorg_libXfixes_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] +git-tree-sha1 = "0e0dc7431e7a0587559f9294aeec269471c991a4" +uuid = "d091e8ba-531a-589c-9de9-94069b037ed8" +version = "5.0.3+4" + +[[Xorg_libXi_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXfixes_jll"] +git-tree-sha1 = "89b52bc2160aadc84d707093930ef0bffa641246" +uuid = "a51aa0fd-4e3c-5386-b890-e753decda492" +version = "1.7.10+4" + +[[Xorg_libXinerama_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll"] +git-tree-sha1 = "26be8b1c342929259317d8b9f7b53bf2bb73b123" +uuid = "d1454406-59df-5ea1-beac-c340f2130bc3" +version = "1.1.4+4" + +[[Xorg_libXrandr_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll"] +git-tree-sha1 = "34cea83cb726fb58f325887bf0612c6b3fb17631" +uuid = "ec84b674-ba8e-5d96-8ba1-2a689ba10484" +version = "1.5.2+4" + +[[Xorg_libXrender_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] +git-tree-sha1 = "19560f30fd49f4d4efbe7002a1037f8c43d43b96" +uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa" +version = "0.9.10+4" + +[[Xorg_libpthread_stubs_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb" +uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74" +version = "0.1.0+3" + +[[Xorg_libxcb_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] +git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6" +uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" +version = "1.13.0+3" + +[[Xorg_libxkbfile_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"] +git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2" +uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a" +version = "1.1.0+4" + +[[Xorg_xcb_util_image_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] +git-tree-sha1 = "0fab0a40349ba1cba2c1da699243396ff8e94b97" +uuid = "12413925-8142-5f55-bb0e-6d7ca50bb09b" +version = "0.4.0+1" + +[[Xorg_xcb_util_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll"] +git-tree-sha1 = "e7fd7b2881fa2eaa72717420894d3938177862d1" +uuid = "2def613f-5ad1-5310-b15b-b15d46f528f5" +version = "0.4.0+1" + +[[Xorg_xcb_util_keysyms_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] +git-tree-sha1 = "d1151e2c45a544f32441a567d1690e701ec89b00" +uuid = "975044d2-76e6-5fbe-bf08-97ce7c6574c7" +version = "0.4.0+1" + +[[Xorg_xcb_util_renderutil_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] +git-tree-sha1 = "dfd7a8f38d4613b6a575253b3174dd991ca6183e" +uuid = "0d47668e-0667-5a69-a72c-f761630bfb7e" +version = "0.3.9+1" + +[[Xorg_xcb_util_wm_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] +git-tree-sha1 = "e78d10aab01a4a154142c5006ed44fd9e8e31b67" +uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361" +version = "0.4.1+1" + +[[Xorg_xkbcomp_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"] +git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b" +uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4" +version = "1.4.2+4" + +[[Xorg_xkeyboard_config_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"] +git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d" +uuid = "33bec58e-1273-512f-9401-5d533626f822" +version = "2.27.0+4" + +[[Xorg_xtrans_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845" +uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" +version = "1.4.0+3" [[ZipFile]] deps = ["Libdl", "Printf", "Zlib_jll"] -git-tree-sha1 = "254975fef2fc526583bb9b7c9420fe66ffe09f2f" +git-tree-sha1 = "c3a5637e27e914a7a445b8d0ad063d701931e9f7" uuid = "a5390f91-8eb1-5f08-bee0-b1d1ffed6cea" -version = "0.9.2" +version = "0.9.3" [[Zlib_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "d5bba6485811931e4b8958e2d7ca3738273ac468" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "320228915c8debb12cb434c59057290f0834dbf6" uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.11+15" +version = "1.2.11+18" + +[[Zstd_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "2c1332c54931e83f8f94d310fa447fd743e8d600" +uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" +version = "1.4.8+0" [[Zygote]] -deps = ["AbstractFFTs", "ArrayLayouts", "ChainRules", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "Future", "IRTools", "InteractiveUtils", "LinearAlgebra", "LoopVectorization", "MacroTools", "NNlib", "NaNMath", "Random", "Requires", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "fa45127afd117fca6a8540f92d5e3799daf8339a" +deps = ["AbstractFFTs", "ChainRules", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "IRTools", "InteractiveUtils", "LinearAlgebra", "MacroTools", "NaNMath", "Random", "Requires", "SpecialFunctions", "Statistics", "ZygoteRules"] +git-tree-sha1 = "52835a83f7c899cfcb95f796d584201812887ea8" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.5.5" +version = "0.6.3" [[ZygoteRules]] deps = ["MacroTools"] -git-tree-sha1 = "b3b4882cc9accf6731a08cc39543fbc6b669dca8" +git-tree-sha1 = "9e7a1e8ca60b742e508a315c17eef5211e7fbfd7" uuid = "700de1a5-db45-46bc-99cf-38207098b444" -version = "0.2.0" +version = "0.2.1" [[libass_jll]] -deps = ["Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "f02d0db58888592e98c5f4953cef620ce9274eee" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] +git-tree-sha1 = "acc685bcf777b2202a904cdcb49ad34c2fa1880c" uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0" -version = "0.14.0+3" +version = "0.14.0+4" [[libfdk_aac_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "e17b4513993b4413d31cffd1b36a63625ebbc3d3" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "7a5780a0d9c6864184b3a2eeeb833a0c871f00ab" uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280" -version = "0.1.6+3" +version = "0.1.6+4" + +[[libpng_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] +git-tree-sha1 = "6abbc424248097d69c0c87ba50fcb0753f93e0ee" +uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" +version = "1.6.37+6" [[libvorbis_jll]] -deps = ["Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "8014e1c1033009edcfe820ec25877a9f1862ba4c" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] +git-tree-sha1 = "fa14ac25af7a4b8a7f61b287a124df7aab601bcd" uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.6+5" +version = "1.3.6+6" [[x264_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "e496625b900df1b02ab0e02fad316b77446616ef" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "d713c1ce4deac133e3334ee12f4adff07f81778f" uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a" -version = "2020.7.14+1" +version = "2020.7.14+2" [[x265_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "ac7d44fa1639a780d0ae79ca1a5a7f4181131825" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "487da2f8f2f0c8ee0e83f39d13037d6bbf0a45ab" uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76" -version = "3.0.0+2" +version = "3.0.0+3" + +[[xkbcommon_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] +git-tree-sha1 = "ece2350174195bb31de1a63bea3a41ae1aa593b6" +uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd" +version = "0.9.1+5" diff --git a/12_ultima_continued/Project.toml b/12_ultima_continued/Project.toml index 2aa22dd9..f9b0c937 100644 --- a/12_ultima_continued/Project.toml +++ b/12_ultima_continued/Project.toml @@ -1,19 +1,314 @@ -name = "VolterraExp" -uuid = "0faabb05-91c8-4f15-b0c7-da5206200d23" -authors = ["jmartensen "] -version = "0.1.0" - [deps] +AbstractAlgebra = "c3fe647b-3220-5bb0-a1ea-a7954cac585d" +AbstractFFTs = "621f4979-c628-5d54-868e-fcf4e3e8185c" +AbstractTrees = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" +Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" +ArnoldiMethod = "ec485272-7323-5ecc-a04f-4719b315124d" +Arpack = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" +Arpack_jll = "68821587-b530-5797-8361-c406ea357684" +ArrayInterface = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" +ArrayLayouts = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" +Artifacts = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +AxisAlgorithms = "13072b0f-2c55-5437-9ae7-d433b7a33950" +BFloat16s = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" +BandedMatrices = "aae01518-5342-5314-be14-df237901396f" +Base64 = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" +BenchmarkTools = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" +BinaryProvider = "b99e7846-7c00-51b0-8f62-c81ae34c0232" +BoundaryValueDiffEq = "764a87c0-6b3e-53db-9096-fe964310641d" +Bzip2_jll = "6e34b625-4abd-537c-b88f-471c36dfa7a0" +CEnum = "fa961155-64e5-5f13-b03f-caf6b980ea82" +CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" +Cairo_jll = "83423d85-b0ee-5818-9007-b63ccbeb887a" +ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" +ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" +Clustering = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" +CodecBzip2 = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" +CodecZlib = "944b1d66-785c-5afd-91f1-9de20f533193" +ColorSchemes = "35d6a980-a343-548e-a6ea-1d62b119f2f4" +ColorTypes = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" +Colors = "5ae59095-9a9b-59fe-a467-6f913c188581" +Combinatorics = 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