diff --git a/DESCRIPTION b/DESCRIPTION
index 73bef44a1..f6a3aef1f 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
Package: tidyr
Title: Tidy Messy Data
-Version: 1.1.4.9000
+Version: 1.2.0
Authors@R: c(
person("Hadley", "Wickham", , "hadley@rstudio.com", role = c("aut", "cre")),
person("Maximilian", "Girlich", role = "aut"),
diff --git a/NEWS.md b/NEWS.md
index e706ab693..1922fce40 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,4 +1,4 @@
-# tidyr (development version)
+# tidyr 1.2.0
## Pivoting
diff --git a/_pkgdown.yml b/_pkgdown.yml
index 9f04a7067..be0a8e6b4 100644
--- a/_pkgdown.yml
+++ b/_pkgdown.yml
@@ -115,6 +115,8 @@ articles:
news:
releases:
+ - text: "Version 1.2.0"
+ href: https://www.tidyverse.org/blog/2022/02/tidyr-1-2-0/
- text: "Version 1.1.0"
href: https://www.tidyverse.org/blog/2020/05/tidyr-1.1.0/
- text: "Version 1.0.0"
diff --git a/cran-comments.md b/cran-comments.md
index ad4ffead8..bdd567bf7 100644
--- a/cran-comments.md
+++ b/cran-comments.md
@@ -1,50 +1,40 @@
## revdepcheck results
-We checked 1210 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+We checked 1451 reverse dependencies (1441 from CRAN + 10 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
- * We saw 0 new problems
- * We failed to check 39 packages
+ * We saw 7 new problems
+ * We failed to check 3 packages
Issues with CRAN packages are summarised below.
+### New problems
+(This reports the first line of each new failure)
+
+* covidregionaldata
+ checking tests ... ERROR
+ checking re-building of vignette outputs ... WARNING
+
+* emayili
+ checking examples ... ERROR
+ checking tests ... ERROR
+
+* simpr
+ checking S3 generic/method consistency ... WARNING
+
+* skater
+ checking re-building of vignette outputs ... WARNING
+
+* sparklyr
+ checking S3 generic/method consistency ... WARNING
+
+* SWMPrExtension
+ checking examples ... ERROR
+
+* xml2relational
+ checking examples ... ERROR
+
### Failed to check
-* airt (NA)
-* andurinha (NA)
-* biscale (NA)
-* cat2cat (NA)
-* CB2 (NA)
-* comperes (NA)
-* coxed (NA)
-* cpr (NA)
-* datawizard (NA)
-* dexterMST (NA)
-* dimRed (NA)
-* diseq (NA)
-* eechidna (NA)
-* eurostat (NA)
-* explor (NA)
-* fitzRoy (NA)
-* fixerapi (NA)
-* fmriqa (NA)
-* ftExtra (NA)
-* geofi (NA)
-* metagam (NA)
-* OncoBayes2 (NA)
-* PupilPre (NA)
-* rabhit (NA)
-* Radviz (NA)
-* RavenR (NA)
-* raw (NA)
-* Rilostat (NA)
-* RKorAPClient (NA)
-* rmdcev (NA)
-* RtutoR (NA)
-* scoper (NA)
-* SCORPIUS (NA)
-* SimBIID (NA)
-* tigger (NA)
-* tinyarray (NA)
-* vivid (NA)
-* wrswoR (NA)
-* XPolaris (NA)
+* loon.ggplot (NA)
+* PLNmodels (NA)
+* vivid (NA)
diff --git a/revdep/README.md b/revdep/README.md
index c438c8cb3..580672fb2 100644
--- a/revdep/README.md
+++ b/revdep/README.md
@@ -2,35 +2,31 @@
## Failed to check (13)
-|package |version |error |warning |note |
-|:--------------|:-------|:-----|:-------|:----|
-|brendaDb |? | | | |
-|BUSpaRse |? | | | |
-|ceRNAnetsim |? | | | |
-|COMPASS |? | | | |
-|ctDNAtools |? | | | |
-|destiny |? | | | |
-|dynfrail |? | | | |
-|evaluator |? | | | |
-|expstudies |? | | | |
-|loon.ggplot |? | | | |
-|mafs |? | | | |
-|MarketMatching |? | | | |
-|vivid |? | | | |
+|package |version |error |warning |note |
+|:-----------|:-------|:-----|:-------|:----|
+|brendaDb |? | | | |
+|BUSpaRse |? | | | |
+|ceRNAnetsim |? | | | |
+|COMPASS |? | | | |
+|ctDNAtools |? | | | |
+|destiny |? | | | |
+|dynfrail |? | | | |
+|evaluator |? | | | |
+|expstudies |? | | | |
+|loon.ggplot |? | | | |
+|mafs |? | | | |
+|PLNmodels |0.11.5 |1 | | |
+|vivid |? | | | |
-## New problems (11)
+## New problems (7)
-|package |version |error |warning |note |
-|:--------------------------------------------------|:-------|:------|:-------|:----|
-|[covidregionaldata](problems.md#covidregionaldata) |0.9.2 |__+1__ |__+1__ |1 |
-|[crosstable](problems.md#crosstable) |0.3.2 |__+1__ | | |
-|[emayili](problems.md#emayili) |0.7.0 |__+2__ | | |
-|[iotables](problems.md#iotables) |0.4.7 | |__+1__ | |
-|[simpr](problems.md#simpr) |0.2.1 | |__+1__ | |
-|[skater](problems.md#skater) |0.1.0 | |__+1__ | |
-|[sparklyr](problems.md#sparklyr) |1.7.4 | |__+1__ |2 |
-|[SWMPrExtension](problems.md#swmprextension) |2.1.0 |__+1__ | | |
-|[tidygate](problems.md#tidygate) |0.4.8 |__+1__ | | |
-|[Tplyr](problems.md#tplyr) |0.4.3 |__+2__ |__+1__ | |
-|[xml2relational](problems.md#xml2relational) |0.1.0 |__+1__ | | |
+|package |version |error |warning |note |
+|:--------------------------------------------------|:-------|:------|:--------|:----|
+|[covidregionaldata](problems.md#covidregionaldata) |0.9.2 |__+1__ |__+1__ |1 |
+|[emayili](problems.md#emayili) |0.7.0 |__+2__ | | |
+|[simpr](problems.md#simpr) |0.2.1 | |__+1__ | |
+|[skater](problems.md#skater) |0.1.0 | |__+1__ | |
+|[sparklyr](problems.md#sparklyr) |1.7.4 | |1 __+1__ |1 |
+|[SWMPrExtension](problems.md#swmprextension) |2.1.0 |__+1__ | | |
+|[xml2relational](problems.md#xml2relational) |0.1.0 |__+1__ | | |
diff --git a/revdep/cran.md b/revdep/cran.md
index e223fd8aa..bdd567bf7 100644
--- a/revdep/cran.md
+++ b/revdep/cran.md
@@ -1,8 +1,8 @@
## revdepcheck results
-We checked 1449 reverse dependencies (1439 from CRAN + 10 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
+We checked 1451 reverse dependencies (1441 from CRAN + 10 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
- * We saw 11 new problems
+ * We saw 7 new problems
* We failed to check 3 packages
Issues with CRAN packages are summarised below.
@@ -14,16 +14,10 @@ Issues with CRAN packages are summarised below.
checking tests ... ERROR
checking re-building of vignette outputs ... WARNING
-* crosstable
- checking tests ... ERROR
-
* emayili
checking examples ... ERROR
checking tests ... ERROR
-* iotables
- checking re-building of vignette outputs ... WARNING
-
* simpr
checking S3 generic/method consistency ... WARNING
@@ -36,19 +30,11 @@ Issues with CRAN packages are summarised below.
* SWMPrExtension
checking examples ... ERROR
-* tidygate
- checking examples ... ERROR
-
-* Tplyr
- checking examples ... ERROR
- checking tests ... ERROR
- checking re-building of vignette outputs ... WARNING
-
* xml2relational
checking examples ... ERROR
### Failed to check
-* loon.ggplot (NA)
-* MarketMatching (NA)
-* vivid (NA)
+* loon.ggplot (NA)
+* PLNmodels (NA)
+* vivid (NA)
diff --git a/revdep/failures.md b/revdep/failures.md
index 1c4b90abc..d87ab1761 100644
--- a/revdep/failures.md
+++ b/revdep/failures.md
@@ -180,7 +180,7 @@ Run `cloud_details(, "ctDNAtools")` for more info
* Version: NA
* GitHub: NA
* Source code: https://github.com/cran/destiny
-* Number of recursive dependencies: 149
+* Number of recursive dependencies: 122
Run `cloud_details(, "destiny")` for more info
@@ -215,7 +215,7 @@ Run `cloud_details(, "destiny")` for more info
* Version: NA
* GitHub: NA
* Source code: https://github.com/cran/dynfrail
-* Number of recursive dependencies: 92
+* Number of recursive dependencies: 61
Run `cloud_details(, "dynfrail")` for more info
@@ -420,69 +420,81 @@ Run `cloud_details(, "mafs")` for more info
```
-# MarketMatching
+# PLNmodels
-* Version: 1.2.0
-* GitHub: NA
-* Source code: https://github.com/cran/MarketMatching
-* Date/Publication: 2021-01-08 20:10:02 UTC
-* Number of recursive dependencies: 67
+* Version: 0.11.5
+* GitHub: https://github.com/pln-team/PLNmodels
+* Source code: https://github.com/cran/PLNmodels
+* Date/Publication: 2022-01-20 22:42:49 UTC
+* Number of recursive dependencies: 173
-Run `cloud_details(, "MarketMatching")` for more info
+Run `cloud_details(, "PLNmodels")` for more info
-## Error before installation
-
-### Devel
-
-```
-* using log directory ‘/tmp/workdir/MarketMatching/new/MarketMatching.Rcheck’
-* using R version 4.1.1 (2021-08-10)
-* using platform: x86_64-pc-linux-gnu (64-bit)
-* using session charset: UTF-8
-* using option ‘--no-manual’
-* checking for file ‘MarketMatching/DESCRIPTION’ ... OK
-* checking extension type ... Package
-* this is package ‘MarketMatching’ version ‘1.2.0’
-* checking package namespace information ... OK
-* checking package dependencies ... ERROR
-Packages required but not available: 'CausalImpact', 'bsts', 'Boom'
+## In both
-See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
-manual.
-* DONE
-Status: 1 ERROR
+* checking whether package ‘PLNmodels’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/tmp/workdir/PLNmodels/new/PLNmodels.Rcheck/00install.out’ for details.
+ ```
+## Installation
+### Devel
+```
+* installing *source* package ‘PLNmodels’ ...
+** package ‘PLNmodels’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c nlopt_wrapper.cpp -o nlopt_wrapper.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_diag_cov.cpp -o optim_diag_cov.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_full_cov.cpp -o optim_full_cov.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_genet_cov.cpp -o optim_genet_cov.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_rank_cov.cpp -o optim_rank_cov.o
+...
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+Error: package or namespace load failed for ‘PLNmodels’ in dyn.load(file, DLLpath = DLLpath, ...):
+ unable to load shared object '/tmp/workdir/PLNmodels/new/PLNmodels.Rcheck/00LOCK-PLNmodels/00new/PLNmodels/libs/PLNmodels.so':
+ /tmp/workdir/PLNmodels/new/PLNmodels.Rcheck/00LOCK-PLNmodels/00new/PLNmodels/libs/PLNmodels.so: undefined symbol: nlopt_set_min_objective
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/tmp/workdir/PLNmodels/new/PLNmodels.Rcheck/PLNmodels’
```
### CRAN
```
-* using log directory ‘/tmp/workdir/MarketMatching/old/MarketMatching.Rcheck’
-* using R version 4.1.1 (2021-08-10)
-* using platform: x86_64-pc-linux-gnu (64-bit)
-* using session charset: UTF-8
-* using option ‘--no-manual’
-* checking for file ‘MarketMatching/DESCRIPTION’ ... OK
-* checking extension type ... Package
-* this is package ‘MarketMatching’ version ‘1.2.0’
-* checking package namespace information ... OK
-* checking package dependencies ... ERROR
-Packages required but not available: 'CausalImpact', 'bsts', 'Boom'
-
-See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
-manual.
-* DONE
-Status: 1 ERROR
-
-
-
+* installing *source* package ‘PLNmodels’ ...
+** package ‘PLNmodels’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c nlopt_wrapper.cpp -o nlopt_wrapper.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_diag_cov.cpp -o optim_diag_cov.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_full_cov.cpp -o optim_full_cov.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_genet_cov.cpp -o optim_genet_cov.o
+g++ -std=gnu++11 -I"/opt/R/4.1.1/lib/R/include" -DNDEBUG -I'/opt/R/4.1.1/lib/R/site-library/Rcpp/include' -I'/opt/R/4.1.1/lib/R/site-library/RcppArmadillo/include' -I'/opt/R/4.1.1/lib/R/site-library/nloptr/include' -I/usr/local/include -fpic -g -O2 -c optim_rank_cov.cpp -o optim_rank_cov.o
+...
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+Error: package or namespace load failed for ‘PLNmodels’ in dyn.load(file, DLLpath = DLLpath, ...):
+ unable to load shared object '/tmp/workdir/PLNmodels/old/PLNmodels.Rcheck/00LOCK-PLNmodels/00new/PLNmodels/libs/PLNmodels.so':
+ /tmp/workdir/PLNmodels/old/PLNmodels.Rcheck/00LOCK-PLNmodels/00new/PLNmodels/libs/PLNmodels.so: undefined symbol: nlopt_set_min_objective
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/tmp/workdir/PLNmodels/old/PLNmodels.Rcheck/PLNmodels’
```
diff --git a/revdep/problems.md b/revdep/problems.md
index ea816cc9c..cdc25ab67 100644
--- a/revdep/problems.md
+++ b/revdep/problems.md
@@ -20,7 +20,6 @@ Run `cloud_details(, "covidregionaldata")` for more info
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
- 19. ├─tidyr::complete(data = dplyr::cur_data(), ..., fill = fill, explicit = explicit)
20. ├─tidyr:::complete.data.frame(...)
21. │ ├─tidyr::expand(data, ...)
22. │ └─tidyr:::expand.data.frame(data, ...)
@@ -30,7 +29,8 @@ Run `cloud_details(, "covidregionaldata")` for more info
26. │ └─tidyr:::grid_dots(...)
27. │ └─rlang::eval_tidy(dot, data = mask)
28. └─base::.handleSimpleError(...)
- 29. └─dplyr:::h(simpleError(msg, call))
+ 29. └─dplyr h(simpleError(msg, call))
+ 30. └─rlang::abort(bullets, class = "dplyr_error")
[ FAIL 12 | WARN 0 | SKIP 0 | PASS 203 ]
Error: Test failures
@@ -69,44 +69,6 @@ Run `cloud_details(, "covidregionaldata")` for more info
Note: found 200 marked UTF-8 strings
```
-# crosstable
-
-
-
-* Version: 0.3.2
-* GitHub: https://github.com/DanChaltiel/crosstable
-* Source code: https://github.com/cran/crosstable
-* Date/Publication: 2021-11-27 20:00:02 UTC
-* Number of recursive dependencies: 114
-
-Run `cloud_details(, "crosstable")` for more info
-
-
-
-## Newly broken
-
-* checking tests ... ERROR
- ```
- Running ‘testthat.R’
- Running the tests in ‘tests/testthat.R’ failed.
- Last 13 lines of output:
- 3. │ └─attr(ct, "by_levels") %>% replace_na("NA") %>% unlist()
- 4. ├─base::unlist(.)
- 5. ├─tidyr::replace_na(., "NA")
- 6. └─tidyr:::replace_na.default(., "NA")
- 7. └─vctrs::vec_assign(data, missing, replace, x_arg = "data", value_arg = "replace")
- 8. └─(function () ...
- 9. └─vctrs::vec_default_cast(...)
- 10. └─vctrs::stop_incompatible_cast(...)
- 11. └─vctrs::stop_incompatible_type(...)
- 12. └─vctrs:::stop_incompatible(...)
- 13. └─vctrs:::stop_vctrs(...)
-
- [ FAIL 1 | WARN 0 | SKIP 20 | PASS 326 ]
- Error: Test failures
- Execution halted
- ```
-
# emayili
@@ -136,15 +98,15 @@ Run `cloud_details(, "emayili")` for more info
>
> email <- envelope() %>%
...
- 5. ├─dplyr::select(., -address)
6. ├─tidyr::unnest(., values)
7. ├─tidyr::hoist(., address, "values")
8. │ └─purrr::map(...)
- 9. │ └─tidyr:::.f(.x[[i]], ...)
+ 9. │ └─tidyr .f(.x[[i]], ...)
10. │ └─tidyr:::strike(x, plucker)
11. │ └─vctrs::vec_size(x)
- 12. └─vctrs:::stop_scalar_type(...)
+ 12. └─vctrs:::stop_scalar_type(``(``), "")
13. └─vctrs:::stop_vctrs(msg, "vctrs_error_scalar_type", actual = x)
+ 14. └─rlang::abort(message, class = c(class, "vctrs_error"), ...)
Execution halted
```
@@ -153,64 +115,23 @@ Run `cloud_details(, "emayili")` for more info
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
- 3. ├─dplyr::mutate(...)
4. ├─dplyr::rename(., address = values)
5. ├─dplyr::select(., -address)
6. ├─tidyr::unnest(., values)
7. ├─tidyr::hoist(., address, "values")
8. │ └─purrr::map(...)
- 9. │ └─tidyr:::.f(.x[[i]], ...)
+ 9. │ └─tidyr .f(.x[[i]], ...)
10. │ └─tidyr:::strike(x, plucker)
11. │ └─vctrs::vec_size(x)
- 12. └─vctrs:::stop_scalar_type(...)
+ 12. └─vctrs:::stop_scalar_type(``(``), "")
13. └─vctrs:::stop_vctrs(msg, "vctrs_error_scalar_type", actual = x)
+ 14. └─rlang::abort(message, class = c(class, "vctrs_error"), ...)
[ FAIL 12 | WARN 4 | SKIP 12 | PASS 188 ]
Error: Test failures
Execution halted
```
-# iotables
-
-
-
-* Version: 0.4.7
-* GitHub: https://github.com/rOpenGov/iotables
-* Source code: https://github.com/cran/iotables
-* Date/Publication: 2021-12-22 17:30:02 UTC
-* Number of recursive dependencies: 115
-
-Run `cloud_details(, "iotables")` for more info
-
-
-
-## Newly broken
-
-* checking re-building of vignette outputs ... WARNING
- ```
- Error(s) in re-building vignettes:
- --- re-building ‘environmental_impact.Rmd’ using rmarkdown
-
- Attaching package: 'dplyr'
-
- The following objects are masked from 'package:stats':
-
- filter, lag
-
- The following objects are masked from 'package:base':
- ...
- Columns and rows of CPA_L68A, CPA_T, CPA_U are all zeros and will be removed.
- Joining, by = c("prod_na", "CPA_A01", "CPA_A02", "CPA_A03", "CPA_B", "CPA_C10-12", "CPA_C13-15", "CPA_C16", "CPA_C17", "CPA_C18", "CPA_C19", "CPA_C20", "CPA_C21", "CPA_C22", "CPA_C23", "CPA_C24", "CPA_C25", "CPA_C26", "CPA_C27", "CPA_C28", "CPA_C29", "CPA_C30", "CPA_C31_32", "CPA_C33", "CPA_D", "CPA_E36", "CPA_E37-39", "CPA_F", "CPA_G45", "CPA_G46", "CPA_H49", "CPA_H50", "CPA_H51", "CPA_H52", "CPA_H53", "CPA_I", "CPA_J58", "CPA_J59_60", "CPA_J61", "CPA_J62_63", "CPA_K64", "CPA_K65", "CPA_K66", "CPA_L68B", "CPA_M69_70", "CPA_M71", "CPA_M72", "CPA_M73", "CPA_M74_75", "CPA_N77", "CPA_N78", "CPA_N79", "CPA_N80-82", "CPA_O", "CPA_P", "CPA_Q86", "CPA_Q87_88", "CPA_R90-92", "CPA_R93", "CPA_S94", "CPA_S95", "CPA_S96")
- Columns and rows of CPA_L68A are all zeros and will be removed.
- --- finished re-building ‘working_with_eurostat.Rmd’
-
- SUMMARY: processing the following file failed:
- ‘environmental_impact.Rmd’
-
- Error: Vignette re-building failed.
- Execution halted
- ```
-
# simpr
@@ -278,6 +199,8 @@ Run `cloud_details(, "skater")` for more info
Problem with `mutate()` column `degree_truth`.
ℹ `degree_truth = tidyr::replace_na(degree_truth, "unrelated")`.
✖ Can't convert `replace` to match type of `data` .
+ Caused by error in `stop_vctrs()`:
+ ! Can't convert `replace` to match type of `data` .
--- failed re-building ‘basic_usage.Rmd’
SUMMARY: processing the following file failed:
@@ -321,6 +244,13 @@ Run `cloud_details(, "sparklyr")` for more info
## In both
+* checking dependencies in R code ... WARNING
+ ```
+ Namespace in Imports field not imported from: ‘lifecycle’
+ All declared Imports should be used.
+ Missing or unexported object: ‘rlang::is_env’
+ ```
+
* checking installed package size ... NOTE
```
installed size is 6.3Mb
@@ -329,12 +259,6 @@ Run `cloud_details(, "sparklyr")` for more info
java 3.4Mb
```
-* checking dependencies in R code ... NOTE
- ```
- Namespace in Imports field not imported from: ‘lifecycle’
- All declared Imports should be used.
- ```
-
# SWMPrExtension
@@ -364,7 +288,6 @@ Run `cloud_details(, "SWMPrExtension")` for more info
>
> ## Don't show:
...
- 9. │ └─mask$eval_all_summarise(quo)
10. ├─tidyr::complete(data = dplyr::cur_data(), ..., fill = fill, explicit = explicit)
11. ├─tidyr:::complete.data.frame(...)
12. │ ├─tidyr::expand(data, ...)
@@ -372,136 +295,8 @@ Run `cloud_details(, "SWMPrExtension")` for more info
14. │ └─tidyr:::grid_dots(..., `_data` = data)
15. │ └─rlang::eval_tidy(dot, data = mask)
16. └─base::.handleSimpleError(...)
- 17. └─dplyr:::h(simpleError(msg, call))
- Execution halted
- ```
-
-# tidygate
-
-
-
-* Version: 0.4.8
-* GitHub: https://github.com/stemangiola/tidygate
-* Source code: https://github.com/cran/tidygate
-* Date/Publication: 2022-01-03 23:20:02 UTC
-* Number of recursive dependencies: 62
-
-Run `cloud_details(, "tidygate")` for more info
-
-
-
-## Newly broken
-
-* checking examples ... ERROR
- ```
- Running examples in ‘tidygate-Ex.R’ failed
- The error most likely occurred in:
-
- > ### Name: gate
- > ### Title: DEPRECATED - use gate_chr, gate_int instead inside a
- > ### dplyr::mutate() statement
- > ### Aliases: gate gate.spec_tbl_df gate.tbl_df
- > ### Keywords: internal
- >
- > ### ** Examples
- ...
- 17. ├─tidyr::replace_na(gate, 0)
- 18. └─tidyr:::replace_na.default(gate, 0)
- 19. └─vctrs::vec_assign(data, missing, replace, x_arg = "data", value_arg = "replace")
- 20. └─(function () ...
- 21. └─vctrs::vec_default_cast(...)
- 22. └─vctrs::stop_incompatible_cast(...)
- 23. └─vctrs::stop_incompatible_type(...)
- 24. └─vctrs:::stop_incompatible(...)
- 25. └─vctrs:::stop_vctrs(...)
- Execution halted
- ```
-
-# Tplyr
-
-
-
-* Version: 0.4.3
-* GitHub: https://github.com/atorus-research/Tplyr
-* Source code: https://github.com/cran/Tplyr
-* Date/Publication: 2021-12-06 17:50:02 UTC
-* Number of recursive dependencies: 116
-
-Run `cloud_details(, "Tplyr")` for more info
-
-
-
-## Newly broken
-
-* checking examples ... ERROR
- ```
- Running examples in ‘Tplyr-Ex.R’ failed
- The error most likely occurred in:
-
- > ### Name: Tplyr
- > ### Title: A grammar of summary data for clinical reports
- > ### Aliases: Tplyr Tplyr-package
- >
- > ### ** Examples
- >
- > # Load in pipe
- ...
- 21. │ └─mask$eval_all_summarise(quo)
- 22. ├─tidyr::complete(data = dplyr::cur_data(), ..., fill = fill, explicit = explicit)
- 23. ├─tidyr:::complete.data.frame(...)
- 24. │ ├─tidyr::expand(data, ...)
- 25. │ └─tidyr:::expand.data.frame(data, ...)
- 26. │ └─tidyr:::grid_dots(..., `_data` = data)
- 27. │ └─rlang::eval_tidy(dot, data = mask)
- 28. └─base::.handleSimpleError(...)
- 29. └─dplyr:::h(simpleError(msg, call))
- Execution halted
- ```
-
-* checking tests ... ERROR
- ```
- Running ‘testthat.R’
- Running the tests in ‘tests/testthat.R’ failed.
- Last 13 lines of output:
- dim(s1$formatted_data) not equal to c(3, 11).
- target is NULL, current is numeric
- ── Failure (test-shift.R:71:3): group_shift outputs the expected formatted data ──
- dim(s2$formatted_data) not equal to c(3, 11).
- target is NULL, current is numeric
- ── Failure (test-shift.R:72:3): group_shift outputs the expected formatted data ──
- dim(s3$formatted_data) not equal to c(3, 11).
- target is NULL, current is numeric
- ── Failure (test-shift.R:75:3): group_shift outputs the expected formatted data ──
- t4$layers[[1]]$formatted_data$row_label1 not equal to c("6", "8", "4").
- target is NULL, current is character
-
- [ FAIL 15 | WARN 0 | SKIP 0 | PASS 668 ]
- Error: Test failures
- Execution halted
- ```
-
-* checking re-building of vignette outputs ... WARNING
- ```
- Error(s) in re-building vignettes:
- --- re-building ‘Tplyr.Rmd’ using rmarkdown
- Quitting from lines 333-345 (Tplyr.Rmd)
- Error: processing vignette 'Tplyr.Rmd' failed with diagnostics:
- Problem with `summarise()` input `..1`.
- ℹ `..1 = complete(data = dplyr::cur_data(), ..., fill = fill, explicit = explicit)`.
- ✖ object 'BNRIND' not found
- ℹ The error occurred in group 1: BNRIND = N, ANRIND = N, TRTA = Placebo.
- --- failed re-building ‘Tplyr.Rmd’
-
- ...
- --- failed re-building ‘shift.Rmd’
-
- --- re-building ‘table.Rmd’ using rmarkdown
- --- finished re-building ‘table.Rmd’
-
- SUMMARY: processing the following files failed:
- ‘Tplyr.Rmd’ ‘denom.Rmd’ ‘shift.Rmd’
-
- Error: Vignette re-building failed.
+ 17. └─dplyr h(simpleError(msg, call))
+ 18. └─rlang::abort(bullets, class = "dplyr_error")
Execution halted
```
@@ -534,15 +329,15 @@ Run `cloud_details(, "xml2relational")` for more info
>
> # Find path to custmers.xml example file in package directory
...
- 8. ├─tidyr::replace_na(elem.df[record, i], 0)
9. └─tidyr:::replace_na.default(elem.df[record, i], 0)
10. └─vctrs::vec_assign(data, missing, replace, x_arg = "data", value_arg = "replace")
- 11. └─(function () ...
+ 11. └─vctrs ``()
12. └─vctrs::vec_default_cast(...)
13. └─vctrs::stop_incompatible_cast(...)
14. └─vctrs::stop_incompatible_type(...)
15. └─vctrs:::stop_incompatible(...)
16. └─vctrs:::stop_vctrs(...)
+ 17. └─rlang::abort(message, class = c(class, "vctrs_error"), ...)
Execution halted
```