Home

Welcome to the jcvi wiki! To use jcvi as a generic Bioinformatics library, please follow the instructions on the project page. This wiki hosts standalone applications within the library that are capable of solving domain-specific problems.

Applications

ALLMAPS

ALLMAPS anchors genomic scaffolds onto linkage groups to reconstruct chromosomal assemblies.

GRABSEEDS

GRABSEEDS facilitates computerized extraction of object features and text labels from digital images in large phenotyping experiments.

MCscan-(Python-version)

MCscan facilitates pairwise and multiple genome syntenic comparisons and visualizations.

Gallery

Please visit our Gallery to see our graphics functionality for the production of publication-ready figures.