_pkgdown.yml

template:
  params:
    ganalytics: UA-53797708-7
navbar:
  type: default
  left:
  - text: Introduction
    href: articles/EGRET.html
  - text: Function Help Pages
    href: reference/index.html
  - text: Articles
    menu:
    - text: Enhancements
      href: articles/Enhancements.html
    - text: WRTDS-K In Development
      href: articles/WRTDSK.html
    - text: WRTDS-K Blog Article
      href: articles/Making WRTDS_K flux estimates.html
    - text: Running in Parallel
      href: articles/parallel.html
    - text: Random Residuals
      href: articles/rResid.html
    - text: Seasonal Analysis
      href: articles/SeasonalFraction.html
    - text: Daily Streamflow Trends
      href: articles/streamflow_trend.html
    - text: Trends by month
      href: articles/TrendsByMonth.html
  - text: Bibliograpy
    href: articles/References_WRTDS.html
  right:
  - icon: fa-github fa-lg
    href: https://github.com/USGS-R/EGRET
reference:
  - title: Import Data
    desc:  Functions for user-generated or web retrieval data.
    contents:
      - readUserDaily
      - readUserSample
      - readNWISDaily
      - readNWISSample
      - readWQPSample
      - readNWISInfo
      - readWQPInfo
  - title: WRTDS
    desc: Functions working running and analyzing the WRTDS model
    contents:
      - modelEstimation
      - runPairs
      - runGroups
      - runSeries
      - run_WRTDS
      - setupYears
      - setPA
  - title: Plotting
    desc: Functions for plotting eList objects
    contents:
      - multiPlotDataOverview
      - plotFlowSingle
      - plotFluxQ
      - plotFour
      - plotFourStats
      - plotQTimeDaily
      - plotSDLogQ
      - boxConcMonth
      - boxQTwice
      - plotConcTime
      - plotConcQ
      - plotConcTimeDaily
      - plotFluxTimeDaily
      - plotConcPred
      - plotFluxPred
      - plotResidPred
      - plotResidQ
      - plotResidTime
      - boxResidMonth
      - boxConcThree
      - plotConcHist
      - plotFluxHist
      - plotConcQSmooth
      - plotConcTimeSmooth
      - fluxBiasMulti
      - plotContours
      - plotDiffContours
  - title: Table
    desc: Functions for creating tables from eList objects
    contents:
      - tableChange
      - tableFlowChange
      - tableResults
  - title: WRTDS-K
    desc: Functions for WRTDS with Kalman filtering
    contents:
     - WRTDSKalman
     - plotWRTDSKalman
     - plotTimeSlice
     - cleanUp