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Incorporation of QA/QC results derived from pipelines into IRIDA QA/QC #1305

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apetkau opened this issue Jun 6, 2022 · 0 comments
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back-end Issues relating to the service layer, repository, model, configuration, or database enhancement metadata Sample metadata, line list, and metadata visualizations tools Pipelines and workflows in IRIDA UI User Interface Issue

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@apetkau
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apetkau commented Jun 6, 2022

Describe your idea for a new feature

I would like to see the QA/QC status (PASS, FAIL, etc) checks shown in a project to derive values from analysis results. For example, being able to set criteria like "N50 > 50,000" or "Genome Length < 5 mbp".

Describe how you would access this feature?

These would be criteria setup on a per-project basis which reference specific metadata columns. The QA/QC status for each genomic sample would then display "PASS, WARN, FAIL" depending on the criteria.

Additional information

The existing QA/QC status results in IRIDA projects:

image

@apetkau apetkau added enhancement UI User Interface Issue back-end Issues relating to the service layer, repository, model, configuration, or database metadata Sample metadata, line list, and metadata visualizations tools Pipelines and workflows in IRIDA labels Jun 6, 2022
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back-end Issues relating to the service layer, repository, model, configuration, or database enhancement metadata Sample metadata, line list, and metadata visualizations tools Pipelines and workflows in IRIDA UI User Interface Issue
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