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There is currently no lower limit to k-mer length, and this could cause issues if the k-mer length is, say, below 6-10 bases, and the k-mer is found hundreds or thousands of times in a genome assembly. The user should be warned when the k-mer length is too short for the sequence to have specificity for a particular genome region.
The text was updated successfully, but these errors were encountered:
There is currently no lower limit to k-mer length, and this could cause issues if the k-mer length is, say, below 6-10 bases, and the k-mer is found hundreds or thousands of times in a genome assembly. The user should be warned when the k-mer length is too short for the sequence to have specificity for a particular genome region.
The text was updated successfully, but these errors were encountered: