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@hms-dbmi-cellenics Harvard Medical School DBMI - Cellenics

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    15 repositories

    • iac

      Public
      Cellenics Infrastructure as Code and GitOps repository.
      JavaScript
      •
      Other
      •22•24•0•10•Updated Dec 11, 2024Dec 11, 2024

    • .github

      Public
      MIT License
      •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

    • releases

      Public
      MIT License
      •1•2•0•0•Updated Dec 6, 2024Dec 6, 2024

    • ui

      Public
      Front-end for Cellenics
      JavaScript
      •
      MIT License
      •21•29•2•13•Updated Dec 6, 2024Dec 6, 2024

    • worker

      Public
      k8s worker that executes R code for experiments.
      R
      •
      Other
      •2•12•0•0•Updated Dec 6, 2024Dec 6, 2024

    • pipeline

      Public
      The Cellenics pipeline project for dependency-managed work processing.
      R
      •
      Other
      •3•13•1•7•Updated Dec 6, 2024Dec 6, 2024

    • api

      Public
      The API for Cellenics, staying in between the UI and the backends (worker, pipeline)
      JavaScript
      •
      MIT License
      •21•24•0•3•Updated Dec 6, 2024Dec 6, 2024

    • developer-docs

      Public
      All development docs are kept in here.
      Shell
      •
      MIT License
      •0•12•0•1•Updated Dec 1, 2024Dec 1, 2024

    • cellenics-utils

      Public
      A CLI package for managing Cellenics infrastructure and codebase.
      Python
      •
      Other
      •6•10•0•4•Updated Jul 25, 2023Jul 25, 2023

    • inframock

      Public
      A mocked local copy of the Cellenics AWS stack to ease local development and testing.
      Python
      •
      Other
      •5•5•0•2•Updated Jun 29, 2023Jun 29, 2023

    • testing

      Public
      JavaScript
      •
      Other
      •3•7•0•5•Updated Mar 14, 2023Mar 14, 2023

    • governance

      Public
      MIT License
      •0•0•0•0•Updated Feb 14, 2023Feb 14, 2023

    • vitessce

      Public
      Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
      JavaScript
      •
      MIT License
      •44•5•0•0•Updated Jun 2, 2022Jun 2, 2022

    • issues

      Public
      This repository is used to report and track issues
      0•1•21•1•Updated May 24, 2022May 24, 2022

    • cypress-file-upload

      Public
      File upload testing made easy
      JavaScript
      •
      MIT License
      •90•0•0•0•Updated Sep 22, 2021Sep 22, 2021