Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add 10.1371/journal.pcbi.1005283 #284

Closed
mwatts15 opened this issue Jan 30, 2017 · 2 comments
Closed

Add 10.1371/journal.pcbi.1005283 #284

mwatts15 opened this issue Jan 30, 2017 · 2 comments
Labels
data-add

Comments

@mwatts15
Copy link
Contributor

mwatts15 commented Jan 30, 2017 •
edited
Loading

Add neurotransmitter expression info to insert_worm.py and attach Evidence with the author, title, DOI (below) and one or more URLs. Any other info available for the Evidence is desired.

Machine readable data is attached to the document on the web and is available here: http://journals.plos.org/ploscompbiol/article/file?type=supplementary&id=info:doi/10.1371/journal.pcbi.1005283.s004
DOI: 10.1371/journal.pcbi.1005283

Child of #274
related to #293 (overlap in the data source)
@pgleeson pgleeson mentioned this issue Jan 30, 2017
Open
clbarnes added a commit to clbarnes/PyOpenWorm that referenced this issue Feb 3, 2017
@clbarnes
insert_worm to picks up additional expression data
9fdf753 
Resolves openworm#284

Searches OpenWormData/aux_data/expression_data for innexin, neuropeptide, neurotransmitter and receptor expression data not already added.
@clbarnes clbarnes mentioned this issue Feb 3, 2017
Merged
2 tasks
@mwatts15 mwatts15 mentioned this issue Feb 6, 2017
Open
@mwatts15
Copy link
Contributor Author

mwatts15 commented Feb 6, 2017

Still needs an update to the data sources page.

@clbarnes
Copy link
Contributor

clbarnes commented Feb 6, 2017

I'm going to hold off on that until the data spreadsheet here https://docs.google.com/spreadsheets/d/1kCxOOKu1wAREa9VbBiWVVHh-GEC3kJk0A3YVEipPKcc/edit#gid=0 has been cloned and put in the openworm public folder so I can link to it there rather than my own copy.

Incidentally, I don't think I can label or self-assign issues.

@mwatts15 mwatts15 mentioned this issue Aug 16, 2017
Open
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
data-add
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@mwatts15 @clbarnes