linux-test.yml

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Linux test

on: push

jobs:
  build:
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -el {0}
    strategy:
      fail-fast: false
      matrix:
        python-version: [3.8]

    steps:

    - name: Checkout github repo
      uses: actions/checkout@v2


    - name: Cache conda
      uses: actions/cache@v2
      env:
        cache-name: cache-conda-env
      with:
        path: ~/conda_pkgs_dir
        key: ${{ runner.os }}-conda-${{ env.cache-name }}-${{ hashFiles('environment.yml') }}


    - name: Install package dependencies with setup-miniconda@v2
      uses: conda-incubator/setup-miniconda@v2
      with:
        python-version: ${{ matrix.python-version }}
        miniforge-variant: Mambaforge
        channels: conda-forge
        channel-priority: true
        activate-environment: geoapis
        environment-file: environment.yml
        auto-activate-base: false
        use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
    - run: |
        conda info
        conda list
        conda config --show-sources
        conda config --show
        printenv | sort


    - name: Install test dependencies
      run: |
        mamba install flake8 pytest


    - name: Create .env file with API keys
      env:
        ENV_BASE64: ${{ secrets.ENV_BASE64 }}
      run: |
        echo import .env file contents stored in a GitHub secret and regenerate the expected .env file
        echo $ENV_BASE64 | base64 -d > .env


    - name: Run lint with flake8
      run: |
        # stop the build if there are Python syntax errors or undefined names
        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics


    - name: Run tests with pytest
      run: |
        pytest