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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Checklist</title>
<meta name="description" content="Data Re-use Checklist Template">
<link rel="icon" type="image/ico" href="https://mozillascience.org/img/favicon.ico">
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<style>
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<body class="">
<div id="menu" class="navbar navbar-default navbar-fixed-top">
<div class="container">
<div class="navbar-header">
<a href="https://auremoser.github.io/checklist" class="navbar-brand">Planning for Data Reuse Checklist</a>
<button class="navbar-toggle" type="button" data-toggle="collapse" data-target="#navbar-main">
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
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<div class="navbar-collapse collapse" id="navbar-main">
<ul class="nav navbar-nav navbar-right">
<li><a href="https://auremoser.github.io/checklist">Checklist</a></li>
<li><a href="https://docs.google.com/presentation/d/1kZd-ZD5lru5a7jIbyi9q8cBYCCAKRnIBSRvixYFtoF0/edit?pref=2&pli=1#slide=id.g1088c5b110_0_183" target="_blank">Deck</a></li>
<li><a href="http://mozillascience.github.io/working-open-workshop/data_reuse/" target="_blank">Handout</a></li>
<li><a href="https://github.com/mozillascience/working-open-workshop/blob/gh-pages/handouts/data_reuse_plan_template.md" target="_blank">Template</a></li>
<li><a href="references.html">References</a></li>
<li>
<a href="https://github.com/auremoser/checklist" target="_blank">
<i class="fa fa-github"></i> GitHub
</a>
</li>
</ul>
</div>
</div>
</div>
<div class="container-fluid">
<div class="row">
<nav id="sidebar" class="col-sm-3 col-lg-2" role="navigation">
<ul class="nav nav-pills nav-stacked">
<li>
<a href="#start">Get started</a>
</li>
<li>
<a href="#checklist">Checklist</a>
</li>
<li>
<a href="#help">Help</a>
</li>
<li>
<a href="#contributing">Contributing</a>
</li>
</ul>
</nav>
<section class="documentation col-sm-offset-3 col-lg-offset-2 col-sm-9 col-lg-10">
<h2 id="start">Getting Started</h2>
<p>This checklist is designed to help you understand what someone outside your research project
(or you in 5-10 years) would need to know about your data in order to build on your work.</p>
<p><img src="img/journal.png" style="width:50%;" alt="" /></p>
<h6 style="width:50%;">Image attribution: Roche DG, Lanfear R, Binning SA, Haff TM, Schwanz LE, et al. (2014) Troubleshooting Public Data Archiving: Suggestions to Increase Participation. PLoS Biol 12(1): e1001779. <a href="doi:10.1371/journal.pbio.1001779">doi:10.1371/journal.pbio.1001779</a></h6>
<h2 id="checklist">Checklist</h2>
<h3>WHAT</h3>
<input type="checkbox"> Title of the data set <br/>
<ul>
<li>be descriptive, provide context, more than just the filename</li>
<ul>
<li><em>Example:</em> “Migration patterns on Columbia River Delta” NOT “final.csv”</li>
</ul>
</ul>
<input type="checkbox"> Link to related research publication <br/>
<ul>
<li>full citation and/or permanent link at a bare minimum</li>
<ul>
<li><em>Example:</em> Forstmann BU, et al. (2014) Multi-modal ultra-high resolution
structural 7-Tesla MRI data repository. Scientific Data, 1:140050.
<a href="http://www.nature.com/articles/sdata201450">(http://www.nature.com/articles/sdata201450)</a></li>
</ul>
</ul>
<h3>WHO</h3>
<input type="checkbox"> Person/s or organization responsible for collection of the data <br/>
<ul>
<li>Principle Investigator/s or research group that collected the data</li>
<ul>
<li><em>Example:</em> Dr. Phoebe Marshwana, Agriculture Lab, Michigan State University</li>
</ul>
</ul>
<input type="checkbox"> Contact person / group if there are further questions about the data set <br/>
<ul>
<li>consider a lab email or other contact method that won’t change as people move on in their careers</li>
<ul>
<li><em>Example:</em> Climate Impacts Group, University of Washington: cig @ uw.edu</li>
</ul>
</ul>
<h3>WHERE</h3>
<input type="checkbox"> Location/s data was collected <br/>
<ul>
<li>can be multiple locations, geographic range. Use geographic coordinates, if possible</li>
<ul>
<li><em>Example:</em> Skukuza, Swaziland; N -24.9916 degrees, W 31.5874 degrees</li>
</ul>
</ul>
<input type="checkbox"> Location of published data <br/>
<ul>
<li>where someone can access the data set, preferably a repository that provides a permanent link to the data</li>
<ul>
<li><em>Example:</em> UCSD Digital Collections repository: <a href="ttp://dx.doi.org/10.6075/J08G8HM2">
http://dx.doi.org/10.6075/J08G8HM2</a></li>
</ul>
</ul>
<h3>WHEN</h3>
<input type="checkbox"> Date/s data were collected <br/>
<ul>
<li>use the international standard date format (YYYY-MM-DD hh:mm.ss) and try to be as specific as possible</li>
<ul>
<li><em>Example:</em> 2015-07-01 to 2015-12-31</li>
</ul>
</ul>
<h3>HOW</h3>
<input type="checkbox"> Methods used to collect the data <br/>
<ul>
<li>think of the methodology section of the related publication</li>
<ul>
<li><em>Simplified example:</em>Minimum and maximum observed temperature for
each day was calculated at morning high tide using CoolRead thermometers
calibrated using the XYZ method</li>
</ul>
</ul>
<input type="checkbox"> Methods used to process the data <br/>
<ul>
<li>description of how data was cleaned including how null or missing data were handled</li>
<ul>
<li><em>Example:</em> Differences in site mortality were determined through survdiff tests
performed using X software version 2.10.3. Comparisons with a p-value less than 0.05 (P gt 0.05) were considered different.</li>
</ul>
<li>if you wrote code for processing the data, provide information on where it can be found</li>
<ul>
<li><em>Example:</em> Raw data and scripts used in analysis are available in a GitHub
repository: <a href="https://github.com/rjleveque/tohoku2011-paper1">https://github.com/rjleveque/tohoku2011-paper1</a></li>
</ul>
</ul>
<h2 id="help">Help</h2>
<p>If you have questions about this project you can submit an issue <a href="https://github.com/auremoser/checklist/issues">here on GitHub</a> or you can contact Steph directly at ...</a>.</p>
<h2 id="contributing">Contributing</h2>
<p>If you have fixed a bug with the checklist feel free to open a pull request and we will review and merge the request.</p>
<p>We'd like to see what you can do with this, feel free to fork.</p>
</section>
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