Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Can MAESTRO run on rat? #170

Open
jdrnevich opened this issue Oct 17, 2024 · 0 comments
Open

Can MAESTRO run on rat? #170

jdrnevich opened this issue Oct 17, 2024 · 0 comments

Comments

@jdrnevich
Copy link

Hello,

We are trying to get MAESTRO running for both some mouse and some rat scRNA-Seq data. In looking at this tutorial: https://baigal628.github.io/MAESTRO_documentation/scrna.html the only options for --species is GRCh38 or GRCm38. I don't see anything obvious about how to make custom reference files for other species. Is this possible?

Thanks,
Jenny

@katiejchai

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant