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Species Type #112

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Jaureguy760 opened this issue Feb 2, 2021 · 5 comments
Open

Species Type #112

Jaureguy760 opened this issue Feb 2, 2021 · 5 comments
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question Further information is requested

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@Jaureguy760
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Hi

I'm interested in utilizing this pipeline. Does Maestro support rn6 Rattus norvegicus??

All the best
Sincerely Jeff Jaureguy
@crazyhottommy
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Hi Jeff,
We only support human and mouse for now. We are interested to extend it to other species depending on how many users want.

@crazyhottommy crazyhottommy added the question Further information is requested label Feb 2, 2021
@Jaureguy760
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Hey

Thanks for the response. I really appreciate all your work and the tools you develop! It would be a great niche to fill since none of the other platforms currently support the rn6 Rattus norvegicus.

All the best

@crazyhottommy
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Hi,
Thanks for the feedback. I think we could add a tutorial on how to run MAESTRO for other species.

@f6v
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f6v commented Feb 17, 2021 •
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@crazyhottommy somehow related to this: is it assumed that the data was aligned to hg38? I have count matrices that I want to analyse, but they are hg19.

@crazyhottommy
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yes, MAESTRO supports hg38 and mm10 for the moment.

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@crazyhottommy @f6v @Jaureguy760