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Error: LoadError: Method Error #139

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marzaidi opened this issue Sep 24, 2024 · 2 comments
Open

Error: LoadError: Method Error #139

marzaidi opened this issue Sep 24, 2024 · 2 comments
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@marzaidi
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i keep getting this error when i execute baysor run:

ERROR: LoadError: MethodError: no method matching tryparse(::Type{Symbol}, ::String)

Closest candidates are:
tryparse(::Type{Union{}}, ::Any...; kwargs...)
@ Base parse.jl:257
tryparse(::Type{FilePathsBase.PosixPath}, ::AbstractString)
@ FilePathsBase ~/.julia/packages/FilePathsBase/Laclt/src/posix.jl:15
tryparse(::Type{Float16}, ::AbstractString)
@ Base parse.jl:302
...

Stacktrace:
[1] command_main(ARGS::Vector{String})
@ Baysor ~/.julia/packages/Comonicon/F3QqZ/src/codegen/julia.jl:490
[2] command_main()
@ Baysor ~/.julia/packages/Comonicon/F3QqZ/src/codegen/julia.jl:90
[3] top-level scope
@ ~/.julia/bin/baysor:15

@VPetukhov
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Looks like a duplicate of #138 .

Same as there, please, provide more information. The OS, the command you ran and full error stacktrace and full log.

@VPetukhov VPetukhov added the duplicate This issue or pull request already exists label Sep 24, 2024
@marzaidi
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marzaidi commented Sep 25, 2024

OS:
Linux

Command:
baysor run -x x_location -y y_location -z z_location -g feature_name -m 15 '~/transcripts.csv' --output "outputs/baysor"

ERROR: LoadError: MethodError: no method matching tryparse(::Type{Symbol}, ::String)

Closest candidates are:
tryparse(::Type{Union{}}, ::Any...; kwargs...)
@ Base parse.jl:257
tryparse(::Type{FilePathsBase.PosixPath}, ::AbstractString)
@ FilePathsBase ~/.julia/packages/FilePathsBase/Laclt/src/posix.jl:15
tryparse(::Type{Float16}, ::AbstractString)
@ Base parse.jl:302
...

Stacktrace:
[1] command_main(ARGS::Vector{String})
@ Baysor ~/.julia/packages/Comonicon/F3QqZ/src/codegen/julia.jl:490
[2] command_main()
@ Baysor ~/.julia/packages/Comonicon/F3QqZ/src/codegen/julia.jl:90
[3] top-level scope
@ ~/.julia/bin/baysor:15
in expression starting at /dss/dsshome1/0C/go76saz2/.julia/bin/baysor:15

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