File upload fails with incorrect error message

[FelixKrueger]

I tried to upload a full size gzip compressed FastQ file (one that worked as a subset in a previous test). Librarian produced this error message:

The file has 150bp long reads (untrimmed), is 23GB in size and contains 1,204,065,472 lines. It processes fine through FastQC, and is a fine file all-round.

[kartva]

This might be a misconfiguration with the core FASTQ parser. You said that a subset of the file worked fine in a previous test; how does the subset differ from this file? Was the previously-tested subset the top n lines or something else?

[FelixKrueger]

Indeed, the subset was the first 1 million lines of the same file, also gzip compressed

[kartva]

Note: I suspect some sort of overflow issue in the interop code between JS and the WebAssembly.