CMakeLists.txt

cmake_minimum_required (VERSION 3.10)
project (cytolib)
# required for unit testing using CMake's ctest command
#    include(CTest)
#    enable_testing()
#	set(CYTOLIB_VERSION_MAJOR 2)
#	set(CYTOLIB_VERSION_MINOR 2)
#	set(CYTOLIB_VERSION_PATCH 17)
#	set(CYTOLIB_VERSION ${CYTOLIB_VERSION_MAJOR}.${CYTOLIB_VERSION_MINOR}.${CYTOLIB_VERSION_PATCH} )
 	
 # required modules for our task
    include(CheckIncludeFile)
    include(CheckIncludeFileCXX)
    include(CheckIncludeFiles)
    include(ExternalProject)
  
  	find_package(Protobuf 1.33 REQUIRED)
	
	if(PROTOBUF_FOUND)
#		set(LIBS ${PROTOBUF_LIBRARIES})
		include_directories(${PROTOBUF_INCLUDE_DIRS})
	endif()		
	
  	  
    file(COPY DESCRIPTION DESTINATION .)
    
    execute_process(COMMAND sed -n -e "s/^Version:[ '\\t']\\{1,\\}\\([^ '\\t']\\{1,\\}\\)[ '\\t']*$/\\1/p" DESCRIPTION 
					    OUTPUT_VARIABLE CYTOLIB_VERSION 
					    RESULT_VARIABLE res
					    OUTPUT_STRIP_TRAILING_WHITESPACE)
#    message(STATUS ${CYTOLIB_VERSION}/out/${res}/res)
    configure_file (
	  "${PROJECT_SOURCE_DIR}/cytolibConfig.h.in"
	  "${PROJECT_SOURCE_DIR}/inst/include/cytolib/cytolibConfig.h"
	  )
	 

	
  # we add the sub-directories that we want CMake to scan
    add_subdirectory(thirdparty)

	include_directories(${THIRDPARTY_INCLUDE_DIR})
	set(CMAKE_CXX_STANDARD 14)
	set(CMAKE_CXX_STANDARD_REQUIRED ON)

    add_subdirectory(src)
    add_subdirectory(inst)#install header
#    add_subdirectory(test)