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⚡ replace bwa with bwa-mem2 modules #72

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bunop opened this issue Apr 4, 2024 · 0 comments
Open
2 tasks

⚡ replace bwa with bwa-mem2 modules #72

bunop opened this issue Apr 4, 2024 · 0 comments
Labels
performance Improve the performance or better resource management
Milestone
release v0.7.0

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@bunop
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bunop commented Apr 4, 2024

bwa-mem2 seems to be an improved implementation of bwa mem. Replace old bwa modules in pipeline and test data

  • replace bwa/index with bwamem2/index
  • replace bwa/mem with bwamem2/mem
@bunop bunop added the performance Improve the performance or better resource management label Apr 4, 2024
@bunop bunop added this to the release v0.7.0 milestone Apr 4, 2024
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performance Improve the performance or better resource management
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release v0.7.0
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