From b7f3833909adbea8b636c9af7c63b77725f6b507 Mon Sep 17 00:00:00 2001 From: Paolo Cozzi Date: Thu, 11 Apr 2024 16:24:20 +0200 Subject: [PATCH] :recycle: display current chrom with samtools/depth --- modules/nf-core/samtools/depth/main.nf | 2 +- modules/nf-core/samtools/depth/samtools-depth.diff | 7 +++++++ 2 files changed, 8 insertions(+), 1 deletion(-) diff --git a/modules/nf-core/samtools/depth/main.nf b/modules/nf-core/samtools/depth/main.nf index 005035c..c93a1d9 100644 --- a/modules/nf-core/samtools/depth/main.nf +++ b/modules/nf-core/samtools/depth/main.nf @@ -1,5 +1,5 @@ process SAMTOOLS_DEPTH { - tag "$meta1.id" + tag "$meta3.id" label 'process_low' conda "${moduleDir}/environment.yml" diff --git a/modules/nf-core/samtools/depth/samtools-depth.diff b/modules/nf-core/samtools/depth/samtools-depth.diff index f7b8940..d10a4ec 100644 --- a/modules/nf-core/samtools/depth/samtools-depth.diff +++ b/modules/nf-core/samtools/depth/samtools-depth.diff @@ -1,6 +1,13 @@ Changes in module 'nf-core/samtools/depth' --- modules/nf-core/samtools/depth/main.nf +++ modules/nf-core/samtools/depth/main.nf +@@ -1,5 +1,5 @@ + process SAMTOOLS_DEPTH { +- tag "$meta1.id" ++ tag "$meta3.id" + label 'process_low' + + conda "${moduleDir}/environment.yml" @@ -9,11 +9,13 @@ input: