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[FEATURE] support for nf-test testing system #27

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bunop opened this issue Dec 18, 2023 · 0 comments
Open
2 tasks

[FEATURE] support for nf-test testing system #27

bunop opened this issue Dec 18, 2023 · 0 comments
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dependencies Pull requests that update a dependency file enhancement New feature or request performance Improve the performance or better resource management

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@bunop
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bunop commented Dec 18, 2023

Is your feature request related to a problem? Please describe

nf-core is moving to nf-test testing framework. This mean that we can't copy a new module and running test with the old framework if the module is supported with the new framework

Describe the solution you'd like

Add CI integrations and migrate at least nf-core modules to nf-test

Describe alternatives you've considered

An alternative could be creating an old configuration file from new configuration, however this will add extra stuff when adding a new module to the modules repository

Additional context

  • test and check for CI
  • replace nf-core modules at least
@bunop bunop added dependencies Pull requests that update a dependency file enhancement New feature or request performance Improve the performance or better resource management labels Dec 18, 2023
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Labels
dependencies Pull requests that update a dependency file enhancement New feature or request performance Improve the performance or better resource management
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