💥 define a SMARTER snp coordinate version #37
Labels
enhancement
New feature or request
performance
Improve the performance or better resource management
Milestone
Is your feature request related to a problem? Please describe.
Variant information comes from different sources, each one describing only a subset of all smarter variants. The SMARTER coordinate version should merge the most updated and trusted information and provide a final set of coordinates used to generate the most updated genotype file
Describe the solution you'd like
A solution could be trying to align probes directly to the genome of interest. This could solve ambiguities, determine new relations between chips and get information on the latest assembly
Describe alternatives you've considered
All the evidences for a variation should be compared and order by updated times and by autority. The most updated and trusted coordinates should be used to define a smarter coordinate source which can be displayed in API and web interface.
Additional context
track dates when importing snps from snpchimpillumina_top
attribute should be checked during insertion and written in to databaseThe text was updated successfully, but these errors were encountered: