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✨ convert genotypes from top to forward #111

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4 of 5 tasks
bunop opened this issue Dec 14, 2023 · 0 comments · Fixed by #118 or #131
Closed
4 of 5 tasks

✨ convert genotypes from top to forward #111

bunop opened this issue Dec 14, 2023 · 0 comments · Fixed by #118 or #131
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enhancement New feature or request

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@bunop
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bunop commented Dec 14, 2023

Is your feature request related to a problem? Please describe.
Will be nice to convert genotypes in forward coding format. This will be useful to transform data in other format like VCF

Describe the solution you'd like
The ideal solution will be working with datasets separately, by converting genotypes in temporary files (and folders)

Describe alternatives you've considered
An alternative, will be working on the final dataset and doing the conversion using the SNPconvert.py tool. This will be easier since the data are in the same format and less changes are required to maintain this project

Additional context
Ideally, this task should do:

@bunop bunop added the enhancement New feature or request label Dec 14, 2023
@bunop bunop added this to SMARTER Dec 14, 2023
@github-project-automation github-project-automation bot moved this to To do in SMARTER Dec 14, 2023
@bunop bunop added this to the SMARTER database v1.0.0 milestone Jan 26, 2024
@bunop bunop mentioned this issue May 21, 2024
10 tasks
@github-project-automation github-project-automation bot moved this from To do to Done in SMARTER May 22, 2024
@bunop bunop mentioned this issue May 23, 2024
10 tasks
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Labels
enhancement New feature or request
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