Skip to content

Issues: bids-standard/pybids

RFC: PyBIDS 1.0 layout API
#989 opened Apr 25, 2023 by effigies
Open 8
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

93 Open 389 Closed
93 Open 389 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

0.18.0 not on pypi yet?
#1104 opened Nov 22, 2024 by akhanf
pybids documentation link error
#1103 opened Nov 22, 2024 by acsenrafilho
UPath kwargs are not persisted from layout root to BIDSFiles bug
#1098 opened Nov 11, 2024 by effigies
sqlite3.OperationalError: table associations already exists
#1079 opened Aug 11, 2024 by MRIDude
1
Unable to retrieve json sidecar based on entities of nifti (after replacing extension)
#1072 opened Jul 19, 2024 by psadil
1
MacOS Finder ._* hidden metadata files cause pybids to crash
#1069 opened Jun 20, 2024 by shnizzedy
1
BIDSLayoutIndexer's **filters argument not working as expected
#1062 opened May 10, 2024 by alperkent
6
Inherited metadata overrides immediate metadata for multi-echo data with same-named single-echo bug
#1044 opened Feb 19, 2024 by tsalo
1
Collect entity-linked files in get_associations enhancement
#1043 opened Feb 14, 2024 by tsalo
Custom configurations are not passed to derivatives indexer bug
#1020 opened Aug 28, 2023 by pierre-nedelec
9
Python3.12: Test fails with ValueError
#1012 opened Jul 26, 2023 by penguinpee
3
Please support formulaic 0.6.0
#1000 opened May 2, 2023 by musicinmybrain
4
RFC: PyBIDS 1.0 layout API discussion
#989 opened Apr 25, 2023 by effigies
8
ohbm hackathon idea: pybids (+analysis) in the browser
#982 opened Apr 14, 2023 by adelavega
3
layout.get not returning subject directory paths for datasets with no session layer bug
#978 opened Apr 10, 2023 by alyssadai
3
Support BIDS-URIs
#950 opened Feb 23, 2023 by effigies
2 tasks
1
Use trailing undescore to disambiguate entity names from python keywords
#947 opened Feb 15, 2023 by pvandyken
4
Handle empty directories more gracefully bug
#925 opened Dec 5, 2022 by effigies
pip configparser error on osx
#921 opened Nov 23, 2022 by adelavega
5
Allow de-meaning with respect to mean of a group statsmodels Pertain to implementation of BEP-002 - BIDS StatsModels transformations
#909 opened Oct 31, 2022 by effigies
bids.BIDSLayout.build_path() discards dir- label for dwi images
#895 opened Sep 8, 2022 by ajschadler12
sync_kwargs
#889 opened Sep 6, 2022 by jdkent
Derivatives' configuration file missing some valuable entities
#880 opened Aug 3, 2022 by GalKepler
modeling: Add scan_length parameter to auto_model enhancement good for beginners
#868 opened Jun 7, 2022 by adelavega
variables: Add sparse/dense mode for to to_df, and add alternative design matrix API to access sparse variables statsmodels Pertain to implementation of BEP-002 - BIDS StatsModels variables
#865 opened Jun 1, 2022 by adelavega
@adelavega
3
ProTip! Type g i on any issue or pull request to go back to the issue listing page.