diff --git a/docs/source/content/06_Release_notes.rst b/docs/source/content/06_Release_notes.rst index dcd13d22..d292c8f1 100644 --- a/docs/source/content/06_Release_notes.rst +++ b/docs/source/content/06_Release_notes.rst @@ -4,7 +4,7 @@ Release Notes .. role:: small Version 0.13.0b1 (Bata) ---------------------- +------------------------ 0.13.0b1 : 2023-07-11 ~~~~~~~~~~~~~~~~~~~~~~~~ Notice: this Beta version is specifically developed for multi-sample analysis. Major update points are listed below. diff --git a/docs/source/index.rst b/docs/source/index.rst index 6680a1e5..ab46502b 100644 --- a/docs/source/index.rst +++ b/docs/source/index.rst @@ -74,7 +74,7 @@ Latest Additions ------------------ Version 0.13.0b1 (Beta) -~~~~~~~~~~~~~~ +~~~~~~~~~~~~~~~~~~~~~~~~~ 0.13.0b1 : 2023-07-11 Notice: this Beta version is specifically developed for multi-sample analysis. Major update points are listed below. diff --git a/stereo/algorithm/regulatory_network_inference/plot_grn.py b/stereo/algorithm/regulatory_network_inference/plot_grn.py index 224237af..859c7d82 100644 --- a/stereo/algorithm/regulatory_network_inference/plot_grn.py +++ b/stereo/algorithm/regulatory_network_inference/plot_grn.py @@ -363,14 +363,14 @@ def spatial_scatter_by_regulon_3D( view_horizontal: int=0, show_axis: bool=False, **kwargs): - """ - Plot genes of one regulon on a 3D map + """Plot genes of one regulon on a 3D map + :param network_res_key: the key which specifies inference regulatory network result in data.tl.result, defaults to 'regulatory_network_inference' :param reg_name: specify the regulon you want to draw, defaults to None, if none, will select randomly. :param fn: specify the file name of the output figure, defaults to None, if none, will use regulon name. :param view_vertical: vertical angle to view to the 3D object :param view_horizontal: horizontal angle to view the 3D object - :return: + Example: data.plt.plot_3d_reg('regulatory_network_inference', 'Zfp354c', view_vertical=30, view_horizontal=-30) """