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DESCRIPTION
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DESCRIPTION
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Package: CytoML
Type: Package
Title: A GatingML Interface for Cross Platform Cytometry Data Sharing
Version: 2.15.2
Date: 2016-04-15
Author: Mike Jiang, Jake Wagner
Maintainer: Mike Jiang <[email protected]>
Description: Uses platform-specific implemenations of the GatingML2.0 standard
to exchange gated cytometry data with other software platforms.
License: AGPL-3.0-only
License_restricts_use: no
LazyData: TRUE
Imports:
cytolib(>= 2.3.10),
flowCore (>= 1.99.10),
flowWorkspace (>= 4.1.8),
openCyto (>= 1.99.2),
XML,
data.table,
jsonlite,
RBGL,
Rgraphviz,
Biobase,
methods,
graph,
graphics,
utils,
jsonlite,
dplyr,
grDevices,
methods,
ggcyto (>= 1.11.4),
yaml,
stats,
tibble
biocViews: ImmunoOncology, FlowCytometry, DataImport, DataRepresentation
LinkingTo: cpp11, BH(>= 1.62.0-1), RProtoBufLib, cytolib, Rhdf5lib, flowWorkspace
Suggests:
testthat,
flowWorkspaceData ,
knitr,
rmarkdown,
parallel
VignetteBuilder: knitr
RoxygenNote: 7.2.3
BugReports: https://github.com/RGLab/CytoML/issues
URL: https://github.com/RGLab/CytoML
Collate:
'AllClasses.R'
'GatingSet2cytobank.R'
'GatingSet2flowJo.R'
'gate-methods.R'
'compensation.R'
'cpp11.R'
'cytobank2GatingSet.R'
'cytobankExperiment.R'
'cytolibml_bin_path.R'
'flowJoWorkspace_Methods.R'
'diva2GatingSet.R'
'flowUtils_functions.R'
'gatingML.R'
'read.gatingML.cytobank.R'
'graphGML_methods.R'
'helperFunctions.R'
'parameter-methods.R'
'transforms.R'
'utils.R'
'writeGatingML.R'
SystemRequirements: xml2, GNU make, C++11
Encoding: UTF-8