pre-commit

#!/bin/bash

echo "Hi! I'm your pre-commit code checker."

FILE="dna_rna_tools.py"
TESTS="${FILE%.py}_test.py"

if [ -f $FILE ]; then

	if [ ! -f hooks_env/bin/activate ]; then
		echo "For the first time I need to prepare an environment, give me a minute..."
		python3 -m venv hooks_env
		source hooks_env/bin/activate
		python3 -m pip install --upgrade pip --quiet
		pip install pytest flake8 flake8-bugbear pep8-naming flake8-builtins flake8-functions-names flake8-variables-names pep8-naming pylint mypy --quiet
		echo "hooks_env" >> .gitignore
		echo ".gitignore" >> .gitignore
	else
		source hooks_env/bin/activate
	fi

	echo "$(tput setab 7 setaf 1)>>>>     Code quality checks     <<<<$(tput sgr 0)"
	echo ">>>>  flake8 check"
	flake8 $FILE
	echo ">>>>  pylint check"
	pylint $FILE
	echo ">>>>  mypy check"
	mypy $FILE

	deactivate

else

	echo "Seems no python code to be checked. You can configure me in .git/hook/pre-commit"

fi