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Bit depth incorrect for snapshot download of raw images #688

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arjunrajlab opened this issue May 24, 2024 · 2 comments
Open

Bit depth incorrect for snapshot download of raw images #688

arjunrajlab opened this issue May 24, 2024 · 2 comments
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@arjunrajlab
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If you do download "Raw channels" and "All channels", it downloads 8 bit TIFFs instead of 16 bit (original bit depth).

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@arjunrajlab arjunrajlab added the bug Something isn't working label May 24, 2024
@arjunrajlab arjunrajlab added this to the Alpha-Version milestone May 24, 2024
@arjunrajlab arjunrajlab moved this to Selected for development in Alpha Release May 24, 2024
@bruyeret
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bruyeret commented Jun 6, 2024

I tested it and it looks like it is using the parameter tiffCompression: raw and encoding: TIFF on the /api/v1/item/{itemId}/tiles/region endpoint so I don't know what went wrong
It probably has something to do with girder, can you reproduce @manthey ?

@arjunrajlab
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Interesting! Just to completely specify, what I am hoping to get is a TIFF with the actual raw values from the original data. In this case, the data is 16 bit, so would hope to get a 16 bit TIFF.

@bruyeret bruyeret moved this from Selected for development to In Progress in Alpha Release Jun 6, 2024
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