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fix: gh workflow
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gemygk committed May 24, 2024
1 parent 923b08b commit bb90796
Showing 1 changed file with 6 additions and 7 deletions.
13 changes: 6 additions & 7 deletions .github/workflows/python-package.yml
Original file line number Diff line number Diff line change
Expand Up @@ -52,17 +52,16 @@ jobs:
id: setup-miniconda
continue-on-error: true
with:
auto-update-conda: true
python-version: ${{ matrix.python-version }}
python-version: "3.9"
mamba-version: "*"
repo-token: ${{ secrets.GITHUB_TOKEN }}
miniconda-version: "latest"
# channels: conda-forge, defaults
channels: conda-forge, bioconda, defaults, anaconda
channel-priority: true
activate-environment: "mikado2"
environment-file: ./environment.yml
mamba-version: "*"
use-mamba: true
# channels: conda-forge, defaults
channels: bioconda, conda-forge, defaults, anaconda
use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
activate-environment: "mikado2"
- name: Verify conda environment
run: |
conda info --envs
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