fix: gh workflow #661
Annotations
9 errors and 8 warnings
build (3.9, macos-latest)
Process completed with exit code 1.
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build (3.9, macos-latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
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build (3.9, ubuntu-latest)
The job was canceled because "_3_9_macos-latest" failed.
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build (3.9, ubuntu-latest)
Process completed with exit code 1.
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build (3.10, ubuntu-latest)
The job was canceled because "_3_9_macos-latest" failed.
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build (3.10, ubuntu-latest)
The operation was canceled.
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build (3.10, macos-latest)
The job was canceled because "_3_9_macos-latest" failed.
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build (3.10, macos-latest)
Process completed with exit code 1.
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build (3.10, macos-latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
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build (3.9, macos-latest)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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build (3.9, macos-latest)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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build (3.9, macos-latest)
Unexpected input(s) 'pythn-version', valid inputs are ['installer-url', 'miniconda-version', 'miniforge-variant', 'miniforge-version', 'conda-version', 'conda-build-version', 'environment-file', 'activate-environment', 'python-version', 'add-anaconda-token', 'add-pip-as-python-dependency', 'allow-softlinks', 'auto-activate-base', 'auto-update-conda', 'condarc-file', 'channel-alias', 'channel-priority', 'channels', 'show-channel-urls', 'use-only-tar-bz2', 'remove-profiles', 'mamba-version', 'use-mamba', 'conda-solver', 'architecture', 'clean-patched-environment-file', 'run-post']
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build (3.9, macos-latest)
PackagesNotFoundError: The following packages are not available from current channels:
- samtools[version='>=1.11']
- pysam==0.19.1
- prodigal==2.6.3
- portcullis==1.2.4
- htslib[version='>=1.11']
- diamond==2.0.11
Current channels:
- https://conda.anaconda.org/bioconda/osx-arm64
- https://conda.anaconda.org/conda-forge/osx-arm64
- https://repo.anaconda.com/pkgs/main/osx-arm64
- https://repo.anaconda.com/pkgs/r/osx-arm64
- https://conda.anaconda.org/anaconda/osx-arm64
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
Note: 'use_only_tar_bz2' is enabled. This might be omitting some
packages from the index. Set this option to 'false' and retry.
|
build (3.9, ubuntu-latest)
Unexpected input(s) 'pythn-version', valid inputs are ['installer-url', 'miniconda-version', 'miniforge-variant', 'miniforge-version', 'conda-version', 'conda-build-version', 'environment-file', 'activate-environment', 'python-version', 'add-anaconda-token', 'add-pip-as-python-dependency', 'allow-softlinks', 'auto-activate-base', 'auto-update-conda', 'condarc-file', 'channel-alias', 'channel-priority', 'channels', 'show-channel-urls', 'use-only-tar-bz2', 'remove-profiles', 'mamba-version', 'use-mamba', 'conda-solver', 'architecture', 'clean-patched-environment-file', 'run-post']
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build (3.10, ubuntu-latest)
Unexpected input(s) 'pythn-version', valid inputs are ['installer-url', 'miniconda-version', 'miniforge-variant', 'miniforge-version', 'conda-version', 'conda-build-version', 'environment-file', 'activate-environment', 'python-version', 'add-anaconda-token', 'add-pip-as-python-dependency', 'allow-softlinks', 'auto-activate-base', 'auto-update-conda', 'condarc-file', 'channel-alias', 'channel-priority', 'channels', 'show-channel-urls', 'use-only-tar-bz2', 'remove-profiles', 'mamba-version', 'use-mamba', 'conda-solver', 'architecture', 'clean-patched-environment-file', 'run-post']
|
build (3.10, macos-latest)
Unexpected input(s) 'pythn-version', valid inputs are ['installer-url', 'miniconda-version', 'miniforge-variant', 'miniforge-version', 'conda-version', 'conda-build-version', 'environment-file', 'activate-environment', 'python-version', 'add-anaconda-token', 'add-pip-as-python-dependency', 'allow-softlinks', 'auto-activate-base', 'auto-update-conda', 'condarc-file', 'channel-alias', 'channel-priority', 'channels', 'show-channel-urls', 'use-only-tar-bz2', 'remove-profiles', 'mamba-version', 'use-mamba', 'conda-solver', 'architecture', 'clean-patched-environment-file', 'run-post']
|
build (3.10, macos-latest)
PackagesNotFoundError: The following packages are not available from current channels:
- samtools[version='>=1.11']
- pysam==0.19.1
- prodigal==2.6.3
- portcullis==1.2.4
- htslib[version='>=1.11']
- diamond==2.0.11
Current channels:
- https://conda.anaconda.org/bioconda/osx-arm64
- https://conda.anaconda.org/conda-forge/osx-arm64
- https://repo.anaconda.com/pkgs/main/osx-arm64
- https://repo.anaconda.com/pkgs/r/osx-arm64
- https://conda.anaconda.org/anaconda/osx-arm64
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
Note: 'use_only_tar_bz2' is enabled. This might be omitting some
packages from the index. Set this option to 'false' and retry.
|