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DESCRIPTION
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DESCRIPTION
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Package: igsc
Title: Immunoglobolin sequences from scRNAseq
Version: 0.0.0.9901
Authors@R:
person(given = "Christopher Mark",
family = "Skopnik",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-6089-4769"))
Description: Retrieve and process immunoglobulin sequences from 10X Genomics CellRanger output and align them to IMGTs reference gene segments. And some other things.
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Imports:
BiocManager,
crayon,
dplyr,
ggplot2,
magrittr,
openxlsx,
parallel,
pbapply,
randomNames,
RColorBrewer,
reshape2,
stats,
stringdist,
stringr,
tidyr,
utils,
purrr,
methods,
rlang,
scales,
vroom
Suggests:
rmarkdown,
knitr,
tidyverse,
ggbeeswarm,
fcexpr,
DECIPHER,
Biostrings,
farver,
Peptides,
ggmsa
VignetteBuilder: knitr
Depends:
R (>= 2.10)